Yersinia ruckeri Big Creek 74 (serotype O2): UGYR_00640
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Entry
UGYR_00640 CDS
T03887
Name
(GenBank) formate dehydrogenase
KO
K22015
formate dehydrogenase (hydrogenase) [EC:
1.17.98.4
1.17.98.-]
Organism
yrb
Yersinia ruckeri Big Creek 74 (serotype O2)
Pathway
yrb00680
Methane metabolism
yrb00720
Other carbon fixation pathways
yrb01100
Metabolic pathways
yrb01120
Microbial metabolism in diverse environments
yrb01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
yrb00001
]
09100 Metabolism
09102 Energy metabolism
00720 Other carbon fixation pathways
UGYR_00640
00680 Methane metabolism
UGYR_00640
Enzymes [BR:
yrb01000
]
1. Oxidoreductases
1.17 Acting on CH or CH2 groups
1.17.98 With other, known, physiological acceptors
1.17.98.4 formate dehydrogenase (hydrogenase)
UGYR_00640
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Gene cluster
GFIT
Motif
Pfam:
Molybdopterin
Molydop_binding
Molybdop_Fe4S4
PLD_C
Motif
Other DBs
NCBI-ProteinID:
AKA37039
UniProt:
A0A380QL06
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Position
complement(157294..159465)
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AA seq
723 aa
AA seq
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MKKITTVCPYCGAGCKMNLVVDNGKIVRAEAAEGVTNQGELCLKGYYGWDFLNDTKLLTP
RLTQPLIRRHKGGKFEAVSWDEAIRYTAQRLKEIKQKYGPRSIMHTGSSRGTGNETNYVM
QKFARAVIGTNNVDCCARVCHGPSVAGLQATLGNGAMSNSIGDIENSKCLLVIGYNCADS
HPIVARRVIKAKEKGAQIIVCDPRRIETARIADQHLQITNGCNMALVNAFAYVLIEENLY
DYDYVAKYTEGFDEYRKNVADYSPEAVAEQTGVSAQQIRQAMRTYAAAPSATIMWGMGVT
QFGQAVDVVKGLAGLALLTGNIGRANVGVGPVRGQNNVQGACDMGVLPNEFPGYQSVTDP
LVRAKFADAWGIDVNQMDTEVGHRITEIPHLALEGHVKAYYIMGEDPLQTEADLSLVRKG
FEALELVIVQDIFMTKTAEQADVILPATSWGEHGGVFSCADRGFQRFEKAIEPKYNIKRD
WEIISLLSSELGYPMHYNDNQEIWDEMRELCPLFYGATYEKMGTLGHIQWPCTTLDSPGT
PFLYQDNHFDTPSGKGQLFAAPWRAPAEVPDADYPLVLCTVREVGHYSCRSMTGNCAALQ
TLADEPGFVQMHPQDAQVLGIRDQQLVWVSSRRGKVISRANYNERINLGAVYMTYQWWIG
ACNELTQENLDPISKTPETKYCAVKVEHIADQRWAENFAQQSYSDMKARLRSAVEDVIPV
VEI
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaaatcaccactgtctgcccttactgcggggccggatgcaaaatgaatctggtt
gtggataacggcaaaatcgttcgtgcagaagcggctgaaggtgtcaccaatcaaggggag
ctctgtctgaagggctattacggctgggatttccttaatgataccaaactgctcacaccg
cgcctgacgcaaccactgattcgccgtcataaaggcggtaaatttgaagcggtcagttgg
gatgaagccatccgttatacggcgcaacgcctaaaagaaatcaaacaaaaatatggccca
cgttcgattatgcataccggttcgtcccgtggtactggcaatgaaaccaactatgtgatg
cagaaatttgcccgggcggtgatcggtacgaacaatgttgattgttgtgcccgtgtgtgt
cacggcccgtcagttgccggcctgcaagccacgctcggcaacggcgcgatgagtaactcc
atcggcgatattgaaaactccaaatgcttgttggtgatcggctataactgcgccgattcc
cacccgatcgttgcccgtcgcgtgatcaaagccaaagaaaaaggcgcacagattattgtc
tgtgacccacgccgtatcgaaaccgcccgcatcgccgaccagcatttgcaaatcaccaac
ggctgcaatatggcattggtcaatgctttcgcgtatgtgctgatcgaagaaaatctgtat
gactacgactatgtcgccaaatacaccgaaggcttcgatgagtaccgcaaaaacgtagcc
gactattcacctgaagccgtcgcggaacagacgggtgtttcggcacaacaaattcgtcaa
gcgatgcgaacttacgctgccgcgccttctgccaccatcatgtggggcatgggtgttacc
caatttggtcaggcggtggacgtggtgaaaggtctggctgggttggcattgctgaccggt
aatatcgggcgagccaacgttggcgtcggtccggtgcgggggcaaaataacgtgcagggt
gcctgtgatatgggcgtcttgccgaatgagttccctggctatcagtcggttaccgaccct
ctagttcgagcgaaatttgccgacgcatggggcattgatgttaatcaaatggataccgaa
gtcggccatcgtattaccgaaatcccgcatctggcgttggaaggccacgttaaagcctac
tacatcatgggggaagatccgttgcagaccgaagccgatttaagtctggtacgtaagggc
tttgaagcattggagttggtgatagttcaggacattttcatgaccaaaacggcagagcag
gccgacgtcattctacccgccacctcttggggtgaacacggaggcgtgttctcctgtgcc
gatcgcggtttccaacgttttgagaaagcgattgagccgaaatacaacatcaaacgtgac
tgggaaattattagcctactatccagtgagctgggttatccgatgcactataacgacaac
caggaaatttgggatgaaatgcgtgaactatgtccactgttctacggtgcaacctacgag
aaaatgggtacgctggggcatattcagtggccttgcaccacgctagacagccctggaacg
ccatttttgtatcaggacaatcacttcgatactccatcgggtaaaggccagctttttgct
gcgccgtggcgcgcgccagccgaagtgccggacgccgattacccgttggtgctctgtacc
gtgcgcgaagtcggtcactattcctgccgctcaatgaccggtaactgtgccgccttgcaa
acactggccgacgaaccaggctttgtgcagatgcacccacaggatgcgcaggtgctgggt
attcgcgatcagcagttggtctgggtctcctcacgccgcggtaaagtcatttcacgcgcc
aattacaacgagcgcatcaatctcggcgcggtgtacatgacttatcaatggtggattggt
gcgtgtaacgaactgacgcaggaaaatttggatccgatctccaaaacgccggaaaccaaa
tattgtgcagtcaaagtcgagcatatcgctgatcagcgttgggccgaaaacttcgcccag
caaagttatagcgacatgaaagcccgtctgcgcagtgccgttgaagatgtgattccagtg
gttgagatttag
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