Zea mays (maize): 541614
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Entry
541614 CDS
T01088
Name
(RefSeq) squalene synthase 1
KO
K00801
farnesyl-diphosphate farnesyltransferase [EC:
2.5.1.21
]
Organism
zma
Zea mays (maize)
Pathway
zma00100
Steroid biosynthesis
zma00909
Sesquiterpenoid and triterpenoid biosynthesis
zma01100
Metabolic pathways
zma01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
zma00001
]
09100 Metabolism
09103 Lipid metabolism
00100 Steroid biosynthesis
541614
09109 Metabolism of terpenoids and polyketides
00909 Sesquiterpenoid and triterpenoid biosynthesis
541614
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
zma01006
]
541614
Enzymes [BR:
zma01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.21 squalene synthase
541614
Prenyltransferases [BR:
zma01006
]
Terpene biosynthesis
Squalene/phytoene synthase
541614
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SQS_PSY
DUF3094
Motif
Other DBs
NCBI-GeneID:
541614
NCBI-ProteinID:
NP_001104839
UniProt:
O22106
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Position
5:complement(3957042..3967809)
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AA seq
401 aa
AA seq
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MGALSRPEEVLALVKLRVAAGQIKRQIPPEEHWAFAYSMLQKVSRSFALVIQQLGPELRN
AVCIFYLVLRALDTVEDDTSIPTEVKVPILQEFYRHIYNRDWHYSCGTNHYKMLMDKFRH
VSTAFLELGEGYQKAIEEVTRRMGAGMAKFICKEVETVDDYDEYCHYVAGLVGYGLSRLF
YAAGTEDLALDSLSNSMGLFLQKTNIIRDYLEDINEIPKSRMFWPREIWSKYADKLEDFK
YEENSKKAVQCLNNMVTDALIHAEECLQYMSALKDPAIFRFCAIPQIMAIGTCALCYNNV
HVFRGVVKMRRGLTARIIDETNSMTDVYTAFYEFSSLIESKIDDSDPNAALTQRRVDSIK
QTCKSSGLVKQRGYHLEKSPYRPMLIMIVLLLVAILFGVMF
NT seq
1206 nt
NT seq
+upstream
nt +downstream
nt
atgggggcgctgtcgcggccggaggaggtgctggcgctggtaaagctgcgggtggcggcg
gggcagatcaagcgccagatcccgcccgaggagcactgggccttcgcctactccatgctc
cagaaggtgtcccgtagcttcgctctcgtcatccagcagctcggacccgaactccgcaat
gccgtgtgcatcttctacctcgtgctccgtgccctcgacaccgttgaggacgacactagc
atcccgaccgaggtgaaggtgcccatcctccaggaattctaccggcacatctacaaccgc
gactggcattattcgtgtggaacaaatcactacaaaatgctaatggataagtttcgccac
gtatccactgccttcctggagcttggtgaaggttaccaaaaggcaatagaagaagtcact
aggcgaatgggtgcaggaatggcaaaatttatatgcaaagaggttgaaactgttgatgac
tatgacgagtattgtcactatgtagctgggctagttggttatggactttccaggctcttc
tatgctgctgggacggaagatctggctctagattcactgtcaaattcaatgggcctattt
ttacagaaaactaacataattagggactatttggaggacataaatgagataccaaagtcc
cgcatgttctggcctcgagagatatggagtaaatatgcagataaacttgaggacttcaaa
tatgaggagaactccaaaaaagcagtacaatgcttgaacaatatggtgactgatgcactg
attcatgctgaagagtgccttcagtacatgtcagccttgaaggatcctgccattttccgt
ttttgtgcaataccccagataatggcaattggaacatgtgctctttgctacaataacgtg
catgtcttcagaggagttgtgaagatgagacgtggtctcacggcacgaataattgacgag
acaaactcaatgacagatgtctatactgctttctatgagttttcttcattgatagagtca
aagattgatgacagtgatccaaatgctgctctaacacagagacgtgtggattcaataaag
caaacttgcaagtcatctggtttggtaaagcaaagggggtaccatttggagaagtcacct
tacaggcctatgctgatcatgattgtcctcctgctggtagctattcttttcggggtaatg
ttctag
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