| T number | T04681 |
| Org_code | paby |
| Name | Salipiger abyssi JLT2014 |
| Category | Type strain |
| Annotation | yes |
| Taxonomy | TAX: 1250539 |
| Lineage | Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria; Rhodobacterales; Roseobacteraceae; Salipiger |
| Brite | KEGG organisms [BR:br08601]
KEGG organisms in the NCBI taxonomy [BR:br08610]
KEGG organisms in taxonomic ranks [BR:br08611] |
| Data source | GenBank (Assembly: GCA_001975705.1 Complete Genome)
BioProject: 315492 |
| Comment | Isolated from deep-sea water of the Southeastern Pacific.
|
| Chromosome | Circular |
| Sequence | GB: CP015093 |
| Length | 4246390 |
| Plasmid | pPABY1; Circular |
| Sequence | GB: CP015091 |
| Length | 250394 |
| Plasmid | pPABY2; Circular |
| Sequence | GB: CP015090 |
| Length | 188936 |
| Plasmid | pPABY3; Circular |
| Sequence | GB: CP015092 |
| Length | 156353 |
| Plasmid | pPABY4; Circular |
| Sequence | GB: CP015095 |
| Length | 134425 |
| Plasmid | pPABY5; Circular |
| Sequence | GB: CP015089 |
| Length | 131420 |
| Plasmid | pPABY6; Circular |
| Sequence | GB: CP015094 |
| Length | 64192 |
| Plasmid | pPABY7; Circular |
| Sequence | GB: CP015097 |
| Length | 56541 |
| Plasmid | pPABY8; Circular |
| Sequence | GB: CP015096 |
| Length | 30421 |
| Statistics | Number of nucleotides: 5259072
Number of protein genes: 5099
Number of RNA genes: 50
|
| Created | 2017 |
| Reference | PMID: 27762339 |
| Authors | Tang K, Yang Y, Lin D, Li S, Zhou W, Han Y, Liu K, Jiao N |
| Title | Genomic, physiologic, and proteomic insights into metabolic versatility in Roseobacter clade bacteria isolated from deep-sea water. |
| Journal | Sci Rep 6:35528 (2016)
DOI: 10.1038/srep35528 |
Salipiger abyssi