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DNMT1 DNA methyltransferase 1 [ Capra hircus (goat) ]

Gene ID: 100861294, updated on 1-Aug-2024

Summary

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Gene symbol
DNMT1
Gene description
DNA methyltransferase 1
See related
EnsemblRapid:ENSCHIG00000023294
Gene type
protein coding
RefSeq status
MODEL
Organism
Capra hircus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Caprinae; Capra
Orthologs
human mouse all
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Genomic context

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See DNMT1 in Genome Data Viewer
Location:
chromosome: 7
Exon count:
43
Annotation release Status Assembly Chr Location
102 current ASM170441v1 (GCF_001704415.1) 7 NC_030814.1 (94592972..94637289, complement)
101 previous assembly CHIR_1.0 (GCF_000317765.1) 7 NC_022299.1 (11232986..11276998, complement)

Chromosome 7 - NC_030814.1Genomic Context describing neighboring genes Neighboring gene suppressor of SWI4 1 homolog Neighboring gene eukaryotic translation initiation factor 3 subunit G Neighboring gene sphingosine-1-phosphate receptor 2 Neighboring gene mitochondrial ribosomal protein L4

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA (cytosine-5-)-methyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables chromatin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
DNA (cytosine-5)-methyltransferase 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Capra hircus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM170441v1 Primary Assembly

Genomic

  1. NC_030814.1 Reference ASM170441v1 Primary Assembly

    Range
    94592972..94637289 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_018051019.1 → XP_017906508.1  DNA (cytosine-5)-methyltransferase 1 isoform X2

    UniProtKB/TrEMBL
    A0A452FSP5, A0AAJ7K878
    Related
    ENSCHIP00000027359.2, ENSCHIT00000035227.2

  2. XM_018051018.1 → XP_017906507.1  DNA (cytosine-5)-methyltransferase 1 isoform X1

    UniProtKB/TrEMBL
    A0A452FSP5, A0AAJ7K887

  3. XM_018051020.1 → XP_017906509.1  DNA (cytosine-5)-methyltransferase 1 isoform X3

    UniProtKB/TrEMBL
    A0A452FSP5, A0AAJ7NTG6

  4. XM_018051021.1 → XP_017906510.1  DNA (cytosine-5)-methyltransferase 1 isoform X3

    UniProtKB/TrEMBL
    A0A452FSP5, A0AAJ7NTG6

  5. XM_018051022.1 → XP_017906511.1  DNA (cytosine-5)-methyltransferase 1 isoform X4

    UniProtKB/TrEMBL
    A0A452FSP5, A0AAJ7NTG8
Nucleotide Protein
Heading Accession and Version

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