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GNG5 G protein subunit gamma 5 [ Sus scrofa (pig) ]

Gene ID: 102166994, updated on 10-Mar-2024

Summary

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Gene symbol
GNG5
Gene description
G protein subunit gamma 5
See related
Ensembl:ENSSSCG00000053185
Gene type
protein coding
RefSeq status
MODEL
Organism
Sus scrofa
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Suina; Suidae; Sus
Expression
Ubiquitous expression in heart (RPKM 123.9), spleen (RPKM 117.8) and 8 other tissues See more
Orthologs
human mouse all
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Genomic context

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See GNG5 in Genome Data Viewer
Location:
chromosome: 6
Exon count:
3
Annotation release Status Assembly Chr Location
106 current Sscrofa11.1 (GCF_000003025.6) 6 NC_010448.4 (129247324..129254973)
105 previous assembly Sscrofa10.2 (GCF_000003025.5) Unplaced Scaffold NW_003538465.1 (37489..44195)

Chromosome 6 - NC_010448.4Genomic Context describing neighboring genes Neighboring gene transmembrane protein 258 pseudogene Neighboring gene spermatogenesis associated 1 Neighboring gene chitobiase Neighboring gene uncharacterized LOC102166593 Neighboring gene ribosome production factor 1 homolog Neighboring gene deoxyribonuclease 2 beta

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Transcriptome data used for gene annotation Transcriptome data used for gene annotation
  • Description: Nine kinds of tissues and a mixture of multiple tissues were sequenced for genome annotation
  • BioProject: PRJNA311523
  • Publication: PMID 27646534
  • Analysis date: Thu Dec 14 17:10:49 2017

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables G-protein beta-subunit binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in G protein-coupled receptor signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of heterotrimeric G-protein complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-5

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Sus scrofa Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Sscrofa11.1 Primary Assembly

Genomic

  1. NC_010448.4 Reference Sscrofa11.1 Primary Assembly

    Range
    129247324..129254973
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_021096357.1 → XP_020952016.1  guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-5

    UniProtKB/TrEMBL
    A0A287B6W0, A0A4X1UZS2
    Related
    ENSSSCP00000052033.2, ENSSSCT00000057198.3
    Conserved Domains (1) summary
    cd00068
    Location:7 → 63
    GGL; G protein gamma subunit-like motifs, the alpha-helical G-gamma chain dimerizes with the G-beta propeller subunit as part of the heterotrimeric G-protein complex; involved in signal transduction via G-protein-coupled receptors
Nucleotide Protein
Heading Accession and Version

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