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LOC103385880 S-adenosylhomocysteine hydrolase-like protein 1 [ Cynoglossus semilaevis (tongue sole) ]

Gene ID: 103385880, updated on 22-Oct-2023

Summary

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Gene symbol
LOC103385880
Gene description
S-adenosylhomocysteine hydrolase-like protein 1
See related
Ensembl:ENSCSEG00000002277
Gene type
protein coding
RefSeq status
MODEL
Organism
Cynoglossus semilaevis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Carangaria; Pleuronectiformes; Pleuronectoidei; Cynoglossidae; Cynoglossinae; Cynoglossus
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Genomic context

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See LOC103385880 in Genome Data Viewer
Location:
chromosome: 11
Exon count:
21
Annotation release Status Assembly Chr Location
102 current Cse_v1.0 (GCF_000523025.1) 11 NC_024317.1 (2862919..2873131)

Chromosome 11 - NC_024317.1Genomic Context describing neighboring genes Neighboring gene cyclin-dependent kinase inhibitor 1A Neighboring gene serine and arginine rich splicing factor 3b Neighboring gene striatin interacting protein 1 Neighboring gene tripartite motif-containing protein 16-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_024317.1 Chromosome 11 Reference Cse_v1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in S-adenosylmethionine cycle IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
S-adenosylhomocysteine hydrolase-like protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cynoglossus semilaevis Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Cse_v1.0 Primary Assembly

Genomic

  1. NC_024317.1 Reference Cse_v1.0 Primary Assembly

    Range
    2862919..2873131
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_008319898.3 → XP_008318120.1  S-adenosylhomocysteine hydrolase-like protein 1 isoform X1

    See identical proteins and their annotated locations for XP_008318120.1

    UniProtKB/TrEMBL
    A0A3P8UM70
    Related
    ENSCSEP00000003482.1, ENSCSET00000003527.1
    Conserved Domains (2) summary
    PRK05476
    Location:124 → 544
    PRK05476; S-adenosyl-L-homocysteine hydrolase; Provisional
    pfam05221
    Location:124 → 549
    AdoHcyase; S-adenosyl-L-homocysteine hydrolase

  2. XM_008319897.2 → XP_008318119.1  S-adenosylhomocysteine hydrolase-like protein 1 isoform X2

    See identical proteins and their annotated locations for XP_008318119.1

    UniProtKB/TrEMBL
    A0A3P8UM70
    Conserved Domains (2) summary
    PRK05476
    Location:124 → 544
    PRK05476; S-adenosyl-L-homocysteine hydrolase; Provisional
    pfam05221
    Location:124 → 549
    AdoHcyase; S-adenosyl-L-homocysteine hydrolase

  3. XM_025059947.1 → XP_024915715.1  S-adenosylhomocysteine hydrolase-like protein 1 isoform X3

    UniProtKB/TrEMBL
    A0A3P8VU87
    Conserved Domains (1) summary
    pfam05221
    Location:1 → 403
    AdoHcyase; S-adenosyl-L-homocysteine hydrolase
Nucleotide Protein
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