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ACOX2 acyl-CoA oxidase 2 [ Nipponia nippon (crested ibis) ]

Gene ID: 104016906, updated on 3-Aug-2024

Summary

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Gene symbol
ACOX2
Gene description
acyl-CoA oxidase 2
Locus tag
Y956_14380
Gene type
protein coding
RefSeq status
MODEL
Organism
Nipponia nippon
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Aequornithes; Pelecaniformes; Threskiornithidae; Nipponia
Orthologs
human mouse all
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Genomic context

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See ACOX2 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
14
Annotation release Status Assembly Chr Location
100 current ASM70822v1 (GCF_000708225.1) Unplaced Scaffold NW_009001774.1 (2581891..2599010, complement)

NW_009001774.1Genomic Context describing neighboring genes Neighboring gene pyruvate dehydrogenase E1 subunit beta Neighboring gene potassium channel tetramerization domain containing 6 Neighboring gene family with sequence similarity 107 member A Neighboring gene FAM3 metabolism regulating signaling molecule D

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_009001774.1 Unplaced Scaffold Reference ASM70822v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables FAD binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables fatty acid binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables palmitoyl-CoA oxidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in fatty acid beta-oxidation using acyl-CoA oxidase IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in lipid homeostasis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in very long-chain fatty acid metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in peroxisome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
peroxisomal acyl-coenzyme A oxidase 2
Names
Peroxisomal acyl-coenzyme A oxidase 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Nipponia nippon Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM70822v1 Primary Assembly

Genomic

  1. NW_009001774.1 Reference ASM70822v1 Primary Assembly

    Range
    2581891..2599010 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_009469857.1 → XP_009468132.1  peroxisomal acyl-coenzyme A oxidase 2

    UniProtKB/TrEMBL
    A0A091VG45
    Conserved Domains (2) summary
    PLN02443
    Location:15 → 668
    PLN02443; acyl-coenzyme A oxidase
    cl09933
    Location:21 → 649
    ACAD; Acyl-CoA dehydrogenase
Nucleotide Protein
Heading Accession and Version

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