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TMEM165 transmembrane protein 165 [ Phalacrocorax carbo (great cormorant) ]

Gene ID: 104040276, updated on 3-Aug-2024

Summary

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Gene symbol
TMEM165
Gene description
transmembrane protein 165
Locus tag
N336_07496
Gene type
protein coding
RefSeq status
MODEL
Organism
Phalacrocorax carbo
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Aequornithes; Suliformes; Phalacrocoracidae; Phalacrocorax
Orthologs
human mouse all
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Genomic context

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See TMEM165 in Genome Data Viewer
Location:
chromosome: 4
Exon count:
6
Annotation release Status Assembly Chr Location
RS_2024_04 current bPhaCar2.1 (GCF_963921805.1) 4 NC_087516.1 (31169370..31180171)
100 previous assembly ASM70892v1 (GCF_000708925.1) Unplaced Scaffold NW_009170082.1 (1268..9811)

Chromosome 4 - NC_087516.1Genomic Context describing neighboring genes Neighboring gene kinase insert domain receptor Neighboring gene steroid 5 alpha-reductase 3 Neighboring gene clock circadian regulator Neighboring gene phosducin like 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables calcium ion transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables manganese ion transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in Golgi calcium ion homeostasis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in Golgi calcium ion transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in calcium ion transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in manganese ion transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
putative divalent cation/proton antiporter TMEM165

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_963921805.1-RS_2024_04

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bPhaCar2.1

Genomic

  1. NC_087516.1 Reference bPhaCar2.1

    Range
    31169370..31180171
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_064449457.1 → XP_064305527.1  putative divalent cation/proton antiporter TMEM165

Nucleotide Protein
Heading Accession and Version

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