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Cndp2 Cytosolic non-specific dipeptidase 2 [ Solenopsis invicta (red fire ant) ]

Gene ID: 105196148, updated on 10-Oct-2024

Summary

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Gene symbol
Cndp2
Gene description
Cytosolic non-specific dipeptidase 2
Locus tag
SINV_09602
Gene type
protein coding
RefSeq status
MODEL
Organism
Solenopsis invicta
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita; Aculeata; Formicoidea; Formicidae; Myrmicinae; Solenopsis
Orthologs
fruit fly honey bee all
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Genomic context

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See Cndp2 in Genome Data Viewer
Location:
chromosome: 9
Exon count:
8
Annotation release Status Assembly Chr Location
104 current UNIL_Sinv_3.0 (GCF_016802725.1) 9 NC_052672.1 (10180965..10184081)
103 previous assembly Si_gnH (GCF_000188075.2) Unplaced Scaffold NW_020521622.1 (101862..104639, complement)

Chromosome 9 - NC_052672.1Genomic Context describing neighboring genes Neighboring gene peroxin 5 Neighboring gene Hermansky-Pudlak syndrome 3 protein homolog Neighboring gene alpha-L-fucosidase Neighboring gene alpha-L-fucosidase Neighboring gene Ubiquitin carboxyl-terminal hydrolase

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The genome of the fire ant Solenopsis invicta. Wurm Y, et al. Proc Natl Acad Sci U S A, 2011 Apr 5. PMID 21282665, Free PMC Article
  2. Comparative transcriptomics reveals the conserved building blocks involved in parallel evolution of diverse phenotypic traits in ants. Morandin C, et al. Genome Biol, 2016 Mar 7. PMID 26951146, Free PMC Article
  3. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  4. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables metallodipeptidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in proteolysis IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
cytosolic non-specific dipeptidase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Solenopsis invicta Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference UNIL_Sinv_3.0

Genomic

  1. NC_052672.1 Reference UNIL_Sinv_3.0

    Range
    10180965..10184081
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_039453952.1 → XP_039309886.1  cytosolic non-specific dipeptidase

    Conserved Domains (1) summary
    cd05676
    Location:10 → 475
    M20_dipept_like_CNDP; M20 cytosolic nonspecific dipeptidases including anserinase and serum carnosinase

  2. XM_039453954.1 → XP_039309888.1  cytosolic non-specific dipeptidase

    Conserved Domains (1) summary
    cd05676
    Location:10 → 475
    M20_dipept_like_CNDP; M20 cytosolic nonspecific dipeptidases including anserinase and serum carnosinase

  3. XM_011161915.3 → XP_011160217.1  cytosolic non-specific dipeptidase

    See identical proteins and their annotated locations for XP_011160217.1

    UniProtKB/TrEMBL
    E9IN77
    Conserved Domains (1) summary
    cd05676
    Location:10 → 475
    M20_dipept_like_CNDP; M20 cytosolic nonspecific dipeptidases including anserinase and serum carnosinase
Nucleotide Protein
Heading Accession and Version

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