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Tctn1 tectonic family member 1 [ Castor canadensis (American beaver) ]

Gene ID: 109696009, updated on 14-Mar-2024

Summary

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Gene symbol
Tctn1
Gene description
tectonic family member 1
See related
Ensembl:ENSCCNG00000008776
Gene type
protein coding
RefSeq status
MODEL
Organism
Castor canadensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Castorimorpha; Castoridae; Castor
Also known as
tectonic-1
Orthologs
human mouse all
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Genomic context

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See Tctn1 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
15
Annotation release Status Assembly Chr Location
100 current C.can genome v1.0 (GCF_001984765.1) Unplaced Scaffold NW_017871759.1 (46..32777)

NW_017871759.1Genomic Context describing neighboring genes Neighboring gene hydrogen voltage gated channel 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_017871759.1 Unplaced Scaffold Reference C.can genome v1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in cilium assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein localization to ciliary transition zone IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of MKS complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
LOW QUALITY PROTEIN: tectonic-1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Castor canadensis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference C.can genome v1.0

Genomic

  1. NW_017871759.1 Reference C.can genome v1.0

    Range
    46..32777
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_020178837.1 → XP_020034426.1  LOW QUALITY PROTEIN: tectonic-1

    UniProtKB/TrEMBL
    A0A8C0ZPD8
    Related
    ENSCCNP00000008283.1, ENSCCNT00000010941.1
    Conserved Domains (1) summary
    pfam07773
    Location:78 → 391
    DUF1619; Protein of unknown function (DUF1619)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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