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GNB1 G protein subunit beta 1 [ Sus scrofa (pig) ]

Gene ID: 110261346, updated on 17-Aug-2024

Summary

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Official Symbol
GNB1provided by VGNC
Official Full Name
G protein subunit beta 1provided by VGNC
Primary source
VGNC:VGNC:88529
See related
Ensembl:ENSSSCG00000021890
Gene type
protein coding
RefSeq status
MODEL
Organism
Sus scrofa
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Suina; Suidae; Sus
Expression
Ubiquitous expression in ovary (RPKM 126.9), lung (RPKM 120.1) and 8 other tissues See more
Orthologs
human mouse all
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Genomic context

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See GNB1 in Genome Data Viewer
Location:
chromosome: 6
Exon count:
14
Annotation release Status Assembly Chr Location
106 current Sscrofa11.1 (GCF_000003025.6) 6 NC_010448.4 (63867155..63957514, complement)

Chromosome 6 - NC_010448.4Genomic Context describing neighboring genes Neighboring gene solute carrier family 35 member E2 Neighboring gene uncharacterized LOC110261347 Neighboring gene NAD kinase Neighboring gene transmembrane protein 52 Neighboring gene calmodulin like 6 Neighboring gene cilia and flagella associated protein 74

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_010448.4 Chromosome 6 Reference Sscrofa11.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Transcriptome data used for gene annotation Transcriptome data used for gene annotation
  • Description: Nine kinds of tissues and a mixture of multiple tissues were sequenced for genome annotation
  • BioProject: PRJNA311523
  • Publication: PMID 27646534
  • Analysis date: Thu Dec 14 17:10:49 2017

Bibliography

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Related articles in PubMed

  1. PEDE (Pig EST Data Explorer) has been expanded into Pig Expression Data Explorer, including 10 147 porcine full-length cDNA sequences. Uenishi H, et al. Nucleic Acids Res, 2007 Jan. PMID 17145712, Free PMC Article
  2. PEDE (Pig EST Data Explorer): construction of a database for ESTs derived from porcine full-length cDNA libraries. Uenishi H, et al. Nucleic Acids Res, 2004 Jan 1. PMID 14681463, Free PMC Article
  3. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  4. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables signaling receptor complex adaptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in G protein-coupled receptor signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of heterotrimeric G-protein complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1
Names
guanine nucleotide binding protein (G protein), beta polypeptide 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Sus scrofa Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Sscrofa11.1 Primary Assembly

Genomic

  1. NC_010448.4 Reference Sscrofa11.1 Primary Assembly

    Range
    63867155..63957514 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_021097493.1 → XP_020953152.1  guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1

    UniProtKB/TrEMBL
    A0A0B8RZJ8, A0A287A7Q3, A0A4X1W8E1, A0A8D0HTB7, A0A8D1AJ78
    Conserved Domains (2) summary
    cd00200
    Location:48 → 340
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
    sd00039
    Location:58 → 95
    7WD40; WD40 repeat [structural motif]

  2. XM_021097491.1 → XP_020953150.1  guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1

    UniProtKB/TrEMBL
    A0A0B8RZJ8, A0A287A7Q3, A0A4X1W8E1, A0A8D0HTB7, A0A8D1AJ78
    Conserved Domains (2) summary
    cd00200
    Location:48 → 340
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
    sd00039
    Location:58 → 95
    7WD40; WD40 repeat [structural motif]

  3. XM_021097495.1 → XP_020953154.1  guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1

    UniProtKB/TrEMBL
    A0A0B8RZJ8, A0A287A7Q3, A0A4X1W8E1, A0A8D0HTB7, A0A8D1AJ78
    Conserved Domains (2) summary
    cd00200
    Location:48 → 340
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
    sd00039
    Location:58 → 95
    7WD40; WD40 repeat [structural motif]

  4. XM_021097490.1 → XP_020953149.1  guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1

    UniProtKB/TrEMBL
    A0A0B8RZJ8, A0A287A7Q3, A0A4X1W8E1, A0A8D0HTB7, A0A8D1AJ78
    Related
    ENSSSCP00000080503.1, ENSSSCT00000102622.1
    Conserved Domains (2) summary
    cd00200
    Location:48 → 340
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
    sd00039
    Location:58 → 95
    7WD40; WD40 repeat [structural motif]

  5. XM_021097492.1 → XP_020953151.1  guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1

    UniProtKB/TrEMBL
    A0A0B8RZJ8, A0A287A7Q3, A0A4X1W8E1, A0A8D0HTB7, A0A8D1AJ78
    Conserved Domains (2) summary
    cd00200
    Location:48 → 340
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
    sd00039
    Location:58 → 95
    7WD40; WD40 repeat [structural motif]

  6. XM_021097494.1 → XP_020953153.1  guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1

    UniProtKB/TrEMBL
    A0A0B8RZJ8, A0A287A7Q3, A0A4X1W8E1, A0A8D0HTB7, A0A8D1AJ78
    Related
    ENSSSCP00000039841.1, ENSSSCT00000043769.3
    Conserved Domains (2) summary
    cd00200
    Location:48 → 340
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
    sd00039
    Location:58 → 95
    7WD40; WD40 repeat [structural motif]
Nucleotide Protein Strain
Heading Accession and Version

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