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LOC110974929 uncharacterized LOC110974929 [ Acanthaster planci (crown-of-thorns starfish) ]

Gene ID: 110974929, updated on 9-Nov-2023

Summary

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Gene symbol
LOC110974929
Gene description
uncharacterized LOC110974929
See related
EnsemblRapid:LOC110974929
Gene type
protein coding
RefSeq status
MODEL
Organism
Acanthaster planci
Lineage
Eukaryota; Metazoa; Echinodermata; Eleutherozoa; Asterozoa; Asteroidea; Valvatacea; Valvatida; Acanthasteridae; Acanthaster
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Genomic context

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See LOC110974929 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
22
Annotation release Status Assembly Chr Location
100 current OKI-Apl_1.0 (GCF_001949145.1) Unplaced Scaffold NW_019091371.1 (605894..716229, complement)

NW_019091371.1Genomic Context describing neighboring genes Neighboring gene lysine-specific demethylase 5A-like Neighboring gene coiled-coil domain-containing protein 77-like Neighboring gene inner nuclear membrane protein Man1-like Neighboring gene uncharacterized LOC110974883

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_019091371 Unplaced Scaffold Reference OKI-Apl_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables guanyl-nucleotide exchange factor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in actin cytoskeleton organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of ARF protein signal transduction IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
uncharacterized protein LOC110974929

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Acanthaster planci Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference OKI-Apl_1.0 Primary Assembly

Genomic

  1. NW_019091371.1 Reference OKI-Apl_1.0 Primary Assembly

    Range
    605894..716229 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_022226898.1 → XP_022082590.1  uncharacterized protein LOC110974929 isoform X5

    UniProtKB/TrEMBL
    A0A8B7XRG5
    Related
    XP_022082590.1, XM_022226898.1
    Conserved Domains (3) summary
    pfam01369
    Location:989 → 1175
    Sec7; Sec7 domain
    cl17171
    Location:1199 → 1321
    PH-like; Pleckstrin homology-like domain
    cl25496
    Location:581 → 919
    Herpes_BLLF1; Herpes virus major outer envelope glycoprotein (BLLF1)

  2. XM_022226894.1 → XP_022082586.1  uncharacterized protein LOC110974929 isoform X1

    UniProtKB/TrEMBL
    A0A8B7XRH7
    Related
    XP_022082586.1, XM_022226894.1
    Conserved Domains (3) summary
    pfam01369
    Location:1011 → 1197
    Sec7; Sec7 domain
    cl17171
    Location:1221 → 1343
    PH-like; Pleckstrin homology-like domain
    cl25496
    Location:603 → 941
    Herpes_BLLF1; Herpes virus major outer envelope glycoprotein (BLLF1)

  3. XM_022226895.1 → XP_022082587.1  uncharacterized protein LOC110974929 isoform X2

    UniProtKB/TrEMBL
    A0A8B7XQY3
    Related
    XP_022082587.1, XM_022226895.1
    Conserved Domains (3) summary
    pfam01369
    Location:1011 → 1197
    Sec7; Sec7 domain
    cl17171
    Location:1221 → 1341
    PH-like; Pleckstrin homology-like domain
    cl25496
    Location:603 → 941
    Herpes_BLLF1; Herpes virus major outer envelope glycoprotein (BLLF1)

  4. XM_022226897.1 → XP_022082589.1  uncharacterized protein LOC110974929 isoform X4

    UniProtKB/TrEMBL
    A0A8B7XP47
    Related
    XP_022082589.1, XM_022226897.1
    Conserved Domains (3) summary
    pfam01369
    Location:1011 → 1197
    Sec7; Sec7 domain
    cl17171
    Location:1221 → 1343
    PH-like; Pleckstrin homology-like domain
    cl25496
    Location:603 → 941
    Herpes_BLLF1; Herpes virus major outer envelope glycoprotein (BLLF1)

  5. XM_022226896.1 → XP_022082588.1  uncharacterized protein LOC110974929 isoform X3

    UniProtKB/TrEMBL
    A0A8B7XP46
    Related
    XP_022082588.1, XM_022226896.1
    Conserved Domains (3) summary
    pfam01369
    Location:1011 → 1197
    Sec7; Sec7 domain
    cl17171
    Location:1221 → 1343
    PH-like; Pleckstrin homology-like domain
    cl25496
    Location:603 → 941
    Herpes_BLLF1; Herpes virus major outer envelope glycoprotein (BLLF1)

  6. XM_022226899.1 → XP_022082591.1  uncharacterized protein LOC110974929 isoform X6

    UniProtKB/TrEMBL
    A0A8B7XRI2
    Related
    XP_022082591.1, XM_022226899.1
    Conserved Domains (3) summary
    pfam01369
    Location:946 → 1132
    Sec7; Sec7 domain
    cl17171
    Location:1156 → 1278
    PH-like; Pleckstrin homology-like domain
    cl25496
    Location:538 → 876
    Herpes_BLLF1; Herpes virus major outer envelope glycoprotein (BLLF1)

  7. XM_022226902.1 → XP_022082594.1  uncharacterized protein LOC110974929 isoform X9

    UniProtKB/TrEMBL
    A0A8B7XP53
    Related
    XP_022082594.1, XM_022226902.1
    Conserved Domains (3) summary
    pfam01369
    Location:924 → 1110
    Sec7; Sec7 domain
    cl17171
    Location:1134 → 1256
    PH-like; Pleckstrin homology-like domain
    cl25496
    Location:516 → 854
    Herpes_BLLF1; Herpes virus major outer envelope glycoprotein (BLLF1)

  8. XM_022226900.1 → XP_022082592.1  uncharacterized protein LOC110974929 isoform X7

    UniProtKB/TrEMBL
    A0A8B7XQY7
    Related
    XP_022082592.1, XM_022226900.1
    Conserved Domains (3) summary
    pfam01369
    Location:940 → 1126
    Sec7; Sec7 domain
    cl17171
    Location:1150 → 1272
    PH-like; Pleckstrin homology-like domain
    cl25496
    Location:532 → 870
    Herpes_BLLF1; Herpes virus major outer envelope glycoprotein (BLLF1)

  9. XM_022226904.1 → XP_022082596.1  uncharacterized protein LOC110974929 isoform X10

    UniProtKB/TrEMBL
    A0A8B7XRI7
    Related
    XP_022082596.1, XM_022226904.1
    Conserved Domains (3) summary
    pfam01369
    Location:913 → 1099
    Sec7; Sec7 domain
    cl17171
    Location:1123 → 1245
    PH-like; Pleckstrin homology-like domain
    cl25496
    Location:505 → 843
    Herpes_BLLF1; Herpes virus major outer envelope glycoprotein (BLLF1)

  10. XM_022226901.1 → XP_022082593.1  uncharacterized protein LOC110974929 isoform X8

    UniProtKB/TrEMBL
    A0A8B7XP51
    Related
    XP_022082593.1, XM_022226901.1
    Conserved Domains (3) summary
    pfam01369
    Location:931 → 1117
    Sec7; Sec7 domain
    cl17171
    Location:1141 → 1263
    PH-like; Pleckstrin homology-like domain
    cl25496
    Location:523 → 861
    Herpes_BLLF1; Herpes virus major outer envelope glycoprotein (BLLF1)
Nucleotide Protein
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