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LOC111106176 S-adenosylhomocysteine hydrolase-like protein 1 [ Crassostrea virginica (eastern oyster) ]

Gene ID: 111106176, updated on 22-Oct-2023

Summary

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Gene symbol
LOC111106176
Gene description
S-adenosylhomocysteine hydrolase-like protein 1
See related
EnsemblRapid:LOC111106176
Gene type
protein coding
RefSeq status
MODEL
Organism
Crassostrea virginica
Lineage
Eukaryota; Metazoa; Spiralia; Lophotrochozoa; Mollusca; Bivalvia; Autobranchia; Pteriomorphia; Ostreida; Ostreoidea; Ostreidae; Crassostrea
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Genomic context

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See LOC111106176 in Genome Data Viewer
Location:
chromosome: 8
Exon count:
22
Annotation release Status Assembly Chr Location
100 current C_virginica-3.0 (GCF_002022765.2) 8 NC_035787.1 (38377812..38410967, complement)

Chromosome 8 - NC_035787.1Genomic Context describing neighboring genes Neighboring gene survival motor neuron protein-like Neighboring gene uncharacterized LOC111106178 Neighboring gene uncharacterized LOC111106179 Neighboring gene uncharacterized LOC111109017 Neighboring gene uncharacterized LOC111109018

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_035787.1 Chromosome 8 Reference C_virginica-3.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in S-adenosylmethionine cycle IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
S-adenosylhomocysteine hydrolase-like protein 1; putative adenosylhomocysteinase 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Crassostrea virginica Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference C_virginica-3.0 Primary Assembly

Genomic

  1. NC_035787.1 Reference C_virginica-3.0 Primary Assembly

    Range
    38377812..38410967 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_022440732.1 → XP_022296440.1  S-adenosylhomocysteine hydrolase-like protein 1 isoform X4

    UniProtKB/TrEMBL
    A0A8B8AZ54
    Related
    XP_022296440.1, XM_022440732.1
    Conserved Domains (1) summary
    pfam05221
    Location:93 → 518
    AdoHcyase; S-adenosyl-L-homocysteine hydrolase

  2. XM_022440730.1 → XP_022296438.1  S-adenosylhomocysteine hydrolase-like protein 1 isoform X2

    UniProtKB/TrEMBL
    A0A8B8B089
    Related
    XP_022296438.1, XM_022440730.1
    Conserved Domains (1) summary
    pfam05221
    Location:105 → 530
    AdoHcyase; S-adenosyl-L-homocysteine hydrolase

  3. XM_022440729.1 → XP_022296437.1  S-adenosylhomocysteine hydrolase-like protein 1 isoform X1

    UniProtKB/TrEMBL
    A0A8B8AZ52
    Related
    XP_022296437.1, XM_022440729.1
    Conserved Domains (1) summary
    pfam05221
    Location:110 → 535
    AdoHcyase; S-adenosyl-L-homocysteine hydrolase

  4. XM_022440733.1 → XP_022296441.1  S-adenosylhomocysteine hydrolase-like protein 1 isoform X5

    UniProtKB/TrEMBL
    A0A8B8AZ97
    Related
    XP_022296441.1, XM_022440733.1
    Conserved Domains (1) summary
    pfam05221
    Location:80 → 505
    AdoHcyase; S-adenosyl-L-homocysteine hydrolase

  5. XM_022440731.1 → XP_022296439.1  S-adenosylhomocysteine hydrolase-like protein 1 isoform X3

    UniProtKB/TrEMBL
    A0A8B8B1E8
    Related
    XP_022296439.1, XM_022440731.1
    Conserved Domains (1) summary
    pfam05221
    Location:99 → 524
    AdoHcyase; S-adenosyl-L-homocysteine hydrolase

  6. XM_022440734.1 → XP_022296442.1  putative adenosylhomocysteinase 3 isoform X6

    UniProtKB/TrEMBL
    A0A8B8AZ57
    Related
    XP_022296442.1, XM_022440734.1
    Conserved Domains (1) summary
    pfam05221
    Location:65 → 490
    AdoHcyase; S-adenosyl-L-homocysteine hydrolase
Nucleotide Protein
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