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AOC2 amine oxidase copper containing 2 [ Delphinapterus leucas (beluga whale) ]

Gene ID: 111166377, updated on 18-Sep-2024

Summary

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Gene symbol
AOC2
Gene description
amine oxidase copper containing 2
See related
Ensembl:ENSDLEG00000016830
Gene type
protein coding
RefSeq status
MODEL
Organism
Delphinapterus leucas
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Whippomorpha; Cetacea; Odontoceti; Monodontidae; Delphinapterus
Orthologs
human mouse all
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Genomic context

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See AOC2 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
5
Annotation release Status Assembly Chr Location
101 current ASM228892v3 (GCF_002288925.2) Unplaced Scaffold NW_022098018.1 (1920129..1926114, complement)
100 previous assembly ASM228892v2 (GCF_002288925.1) Unplaced Scaffold NW_019160956.1 (232948..238931, complement)

NW_022098018.1Genomic Context describing neighboring genes Neighboring gene primary amine oxidase, liver isozyme-like Neighboring gene amine oxidase copper containing 3 Neighboring gene proteasome activator complex subunit 3-like Neighboring gene proteasome activator complex subunit 3 Neighboring gene beclin 1 Neighboring gene cyclin N-terminal domain containing 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables copper ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables primary methylamine oxidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables quinone binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in amine metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
retina-specific copper amine oxidase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Delphinapterus leucas Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM228892v3 Primary Assembly

Genomic

  1. NW_022098018.1 Reference ASM228892v3 Primary Assembly

    Range
    1920129..1926114 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_022558018.2 → XP_022413726.1  retina-specific copper amine oxidase isoform X2

    UniProtKB/TrEMBL
    A0A2Y9LY51
    Conserved Domains (3) summary
    pfam01179
    Location:241 → 649
    Cu_amine_oxid; Copper amine oxidase, enzyme domain
    pfam02727
    Location:1 → 80
    Cu_amine_oxidN2; Copper amine oxidase, N2 domain
    pfam02728
    Location:98 → 196
    Cu_amine_oxidN3; Copper amine oxidase, N3 domain

  2. XM_022558017.2 → XP_022413725.1  retina-specific copper amine oxidase isoform X1

    UniProtKB/TrEMBL
    A0A2Y9LWD5
    Related
    ENSDLEP00000023204.1, ENSDLET00000025541.1
    Conserved Domains (3) summary
    pfam01179
    Location:308 → 716
    Cu_amine_oxid; Copper amine oxidase, enzyme domain
    pfam02727
    Location:62 → 147
    Cu_amine_oxidN2; Copper amine oxidase, N2 domain
    pfam02728
    Location:165 → 263
    Cu_amine_oxidN3; Copper amine oxidase, N3 domain

  3. XM_022558019.1 → XP_022413727.1  retina-specific copper amine oxidase isoform X3

    UniProtKB/TrEMBL
    A0A2Y9M3A7
    Conserved Domains (3) summary
    pfam02727
    Location:62 → 147
    Cu_amine_oxidN2; Copper amine oxidase, N2 domain
    pfam02728
    Location:165 → 263
    Cu_amine_oxidN3; Copper amine oxidase, N3 domain
    cl27386
    Location:308 → 625
    Cu_amine_oxid; Copper amine oxidase, enzyme domain
Nucleotide Protein
Heading Accession and Version

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