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LOC112571487 IQ motif and SEC7 domain-containing protein 1-like [ Pomacea canaliculata ]

Gene ID: 112571487, updated on 9-Nov-2023

Summary

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Gene symbol
LOC112571487
Gene description
IQ motif and SEC7 domain-containing protein 1-like
Locus tag
C0Q70_15240
See related
EnsemblRapid:LOC112571487
Gene type
protein coding
RefSeq status
MODEL
Organism
Pomacea canaliculata
Lineage
Eukaryota; Metazoa; Spiralia; Lophotrochozoa; Mollusca; Gastropoda; Caenogastropoda; Architaenioglossa; Ampullarioidea; Ampullariidae; Pomacea
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Genomic context

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See LOC112571487 in Genome Data Viewer
Location:
chromosome: LG9
Exon count:
20
Annotation release Status Assembly LG Location
100 current ASM307304v1 (GCF_003073045.1) LG9 NC_037598.1 (15338275..15416439)

Linkage Group LG9 - NC_037598.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC112571505 Neighboring gene transfer RNA threonine (anticodon UGU) Neighboring gene lysine-specific demethylase 5A-like Neighboring gene coiled-coil domain-containing protein 77-like Neighboring gene trypsin-1-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_037598.1 Chromosome LG9 Reference ASM307304v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables guanyl-nucleotide exchange factor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in actin cytoskeleton organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of ARF protein signal transduction IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
IQ motif and SEC7 domain-containing protein 1-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Pomacea canaliculata Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM307304v1 Primary Assembly

Genomic

  1. NC_037598.1 Reference ASM307304v1 Primary Assembly

    Range
    15338275..15416439
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_025250491.1 → XP_025106276.1  IQ motif and SEC7 domain-containing protein 1-like isoform X5

    Related
    XP_025106276.1, XM_025250491.1
    Conserved Domains (2) summary
    pfam01369
    Location:620 → 808
    Sec7; Sec7 domain
    pfam16453
    Location:831 → 957
    IQ_SEC7_PH; PH domain

  2. XM_025250487.1 → XP_025106272.1  IQ motif and SEC7 domain-containing protein 1-like isoform X1

    UniProtKB/TrEMBL
    A0A2T7NUC1
    Related
    XP_025106272.1, XM_025250487.1
    Conserved Domains (2) summary
    pfam01369
    Location:620 → 808
    Sec7; Sec7 domain
    pfam16453
    Location:831 → 957
    IQ_SEC7_PH; PH domain

  3. XM_025250490.1 → XP_025106275.1  IQ motif and SEC7 domain-containing protein 1-like isoform X4

    Related
    XP_025106275.1, XM_025250490.1
    Conserved Domains (2) summary
    pfam01369
    Location:564 → 752
    Sec7; Sec7 domain
    pfam16453
    Location:775 → 901
    IQ_SEC7_PH; PH domain

  4. XM_025250488.1 → XP_025106273.1  IQ motif and SEC7 domain-containing protein 1-like isoform X2

    Related
    XP_025106273.1, XM_025250488.1
    Conserved Domains (2) summary
    pfam01369
    Location:584 → 772
    Sec7; Sec7 domain
    pfam16453
    Location:795 → 921
    IQ_SEC7_PH; PH domain

  5. XM_025250493.1 → XP_025106278.1  IQ motif and SEC7 domain-containing protein 1-like isoform X6

    Related
    XP_025106278.1, XM_025250493.1
    Conserved Domains (2) summary
    pfam01369
    Location:466 → 654
    Sec7; Sec7 domain
    pfam16453
    Location:677 → 803
    IQ_SEC7_PH; PH domain

  6. XM_025250489.1 → XP_025106274.1  IQ motif and SEC7 domain-containing protein 1-like isoform X3

    Related
    XP_025106274.1, XM_025250489.1
    Conserved Domains (2) summary
    pfam01369
    Location:571 → 759
    Sec7; Sec7 domain
    pfam16453
    Location:782 → 908
    IQ_SEC7_PH; PH domain

  7. XM_025250492.1 → XP_025106277.1  IQ motif and SEC7 domain-containing protein 1-like isoform X6

    Related
    XP_025106277.1, XM_025250492.1
    Conserved Domains (2) summary
    pfam01369
    Location:466 → 654
    Sec7; Sec7 domain
    pfam16453
    Location:677 → 803
    IQ_SEC7_PH; PH domain

  8. XM_025250494.1 → XP_025106279.1  IQ motif and SEC7 domain-containing protein 1-like isoform X6

    Related
    XP_025106279.1, XM_025250494.1
    Conserved Domains (2) summary
    pfam01369
    Location:466 → 654
    Sec7; Sec7 domain
    pfam16453
    Location:677 → 803
    IQ_SEC7_PH; PH domain
Nucleotide Protein
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