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LOC113501079 tectonic-1 [ Trichoplusia ni (cabbage looper) ]

Gene ID: 113501079, updated on 10-May-2024

Summary

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Gene symbol
LOC113501079
Gene description
tectonic-1
See related
EnsemblRapid:ENSNTCG00000008446
Gene type
protein coding
RefSeq status
MODEL
Organism
Trichoplusia ni
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Lepidoptera; Glossata; Ditrysia; Noctuoidea; Noctuidae; Plusiinae; Trichoplusia
Orthologs
fruit fly all
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Genomic context

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See LOC113501079 in Genome Data Viewer
Location:
chromosome: 15
Exon count:
5
Annotation release Status Assembly Chr Location
100 current tn1 (GCF_003590095.1) 15 NC_039492.1 (7199100..7201499)

Chromosome 15 - NC_039492.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC113501124 Neighboring gene pyruvate kinase-like Neighboring gene Serine/threonine-protein kinase tefu Neighboring gene cullin-3 Neighboring gene bcl-2-related ovarian killer protein homolog A-like Neighboring gene B9 domain-containing protein 2 Neighboring gene trissin receptor-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_039492.1 Chromosome 15 Reference tn1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Transcriptome responses of the host Trichoplusia ni to infection by the baculovirus Autographa californica multiple nucleopolyhedrovirus. Chen YR, et al. J Virol, 2014 Dec. PMID 25231311, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in cilium assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in ciliary transition zone IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
tectonic-1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Trichoplusia ni Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference tn1

Genomic

  1. NC_039492.1 Reference tn1

    Range
    7199100..7201499
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_026882081.1 → XP_026737882.1  tectonic-1

    UniProtKB/TrEMBL
    A0A7E5WBU7
    Related
    ENSNTCP00000010741.1, ENSNTCT00000013331.1
    Conserved Domains (1) summary
    pfam07773
    Location:155 → 447
    DUF1619; Protein of unknown function (DUF1619)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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