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LOC113679197 cysteine dioxygenase type 1-like [ Pocillopora damicornis ]

Gene ID: 113679197, updated on 21-Dec-2023

Summary

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Gene symbol
LOC113679197
Gene description
cysteine dioxygenase type 1-like
See related
EnsemblRapid:LOC113679197
Gene type
protein coding
RefSeq status
MODEL
Organism
Pocillopora damicornis
Lineage
Eukaryota; Metazoa; Cnidaria; Anthozoa; Hexacorallia; Scleractinia; Astrocoeniina; Pocilloporidae; Pocillopora
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Genomic context

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See LOC113679197 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
6
Annotation release Status Assembly Chr Location
100 current ASM370409v1 (GCF_003704095.1) Unplaced Scaffold NW_020846508.1 (87655..95005)

NW_020846508.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC113679211 Neighboring gene RNA guanine-N7 methyltransferase activating subunit-like Neighboring gene coronin-1B-like Neighboring gene uncharacterized LOC113679191

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_020846508 Unplaced Scaffold Reference ASM370409v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables cysteine dioxygenase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ferrous iron binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in L-cysteine catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
cysteine dioxygenase type 1-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Pocillopora damicornis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM370409v1 Primary Assembly

Genomic

  1. NW_020846508.1 Reference ASM370409v1 Primary Assembly

    Range
    87655..95005
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_027196148.1 → XP_027051949.1  cysteine dioxygenase type 1-like isoform X2

    Related
    XP_027051949.1, XM_027196148.1

  2. XM_027196147.1 → XP_027051948.1  cysteine dioxygenase type 1-like isoform X1

    Related
    XP_027051948.1, XM_027196147.1
Nucleotide Protein
Heading Accession and Version

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