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epx eosinophil peroxidase [ Xiphophorus couchianus (Monterrey platyfish) ]

Gene ID: 114151183, updated on 15-Mar-2024

Summary

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Gene symbol
epx
Gene description
eosinophil peroxidase
Gene type
protein coding
RefSeq status
MODEL
Organism
Xiphophorus couchianus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Poeciliidae; Poeciliinae; Xiphophorus
Orthologs
zebrafish all
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Genomic context

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See epx in Genome Data Viewer
Location:
chromosome: 2
Exon count:
16
Annotation release Status Assembly Chr Location
101 current X_couchianus-1.0 (GCF_001444195.1) 2 NC_040229.1 (11608462..11618578)

Chromosome 2 - NC_040229.1Genomic Context describing neighboring genes Neighboring gene general transcription factor IIH, polypeptide 1 Neighboring gene HPS5 biogenesis of lysosomal organelles complex 2 subunit 2 Neighboring gene RAB3A interacting protein (rabin3)-like 1 Neighboring gene bestrophin 1 Neighboring gene ferritin, heavy polypeptide 1b

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_040229.1 Chromosome 2 Reference X_couchianus-1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables heme binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables peroxidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in response to oxidative stress IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in extracellular space IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
eosinophil peroxidase-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Xiphophorus couchianus Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference X_couchianus-1.0 Primary Assembly

Genomic

  1. NC_040229.1 Reference X_couchianus-1.0 Primary Assembly

    Range
    11608462..11618578
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_028028227.1 → XP_027884028.1  eosinophil peroxidase-like

    Conserved Domains (3) summary
    cd00033
    Location:748 → 799
    CCP; Complement control protein (CCP) modules (aka short consensus repeats SCRs or SUSHI repeats) have been identified in several proteins of the complement system
    smart00179
    Location:800 → 827
    EGF_CA; Calcium-binding EGF-like domain
    pfam03098
    Location:153 → 714
    An_peroxidase; Animal haem peroxidase
Nucleotide Protein
Heading Accession and Version

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