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TDEL0G00530 hypothetical protein [ Torulaspora delbrueckii ]

Gene ID: 11504399, updated on 21-Dec-2023

Summary

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Gene symbol
TDEL0G00530
Gene description
hypothetical protein
Locus tag
TDEL_0G00530
Gene type
protein coding
RNA name
hypothetical protein
RefSeq status
PROVISIONAL
Organism
Torulaspora delbrueckii (strain: type strain:CBS 1146)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Torulaspora
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Genomic context

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See TDEL0G00530 in Genome Data Viewer
Location:
chromosome: 7
Exon count:
1
Sequence:
Chromosome: 7; NC_016507.1 (108042..109709)

Chromosome 7 - NC_016507.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_016507.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Evolutionary erosion of yeast sex chromosomes by mating-type switching accidents. Gordon JL, et al. Proc Natl Acad Sci U S A, 2011 Dec 13. PMID 22123960, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables pyridoxal phosphate binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables serine C-palmitoyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in ceramide biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in sphingosine biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
hypothetical protein
XP_003682631.1
  • similar to Saccharomyces cerevisiae LCB1 (YMR296C); ancestral locus Anc_5.28

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_016507.1 Reference assembly

    Range
    108042..109709
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003682583.1 → XP_003682631.1  hypothetical protein TDEL_0G00530 [Torulaspora delbrueckii]

    See identical proteins and their annotated locations for XP_003682631.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    G8ZYE5
    Conserved Domains (2) summary
    pfam00155
    Location:145 → 545
    Aminotran_1_2; Aminotransferase class I and II
    cl18945
    Location:59 → 546
    AAT_I; Aspartate aminotransferase (AAT) superfamily (fold type I) of pyridoxal phosphate (PLP)-dependent enzymes. PLP combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the ...
Nucleotide Protein
Heading Accession and Version

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