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LOC116330517 glutaryl-CoA dehydrogenase, mitochondrial-like [ Oreochromis aureus ]

Gene ID: 116330517, updated on 18-Jun-2024

Summary

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Gene symbol
LOC116330517
Gene description
glutaryl-CoA dehydrogenase, mitochondrial-like
See related
Ensembl:ENSOABG00000016985
Gene type
protein coding
RefSeq status
MODEL
Organism
Oreochromis aureus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Cichlomorphae; Cichliformes; Cichlidae; African cichlids; Pseudocrenilabrinae; Oreochromini; Oreochromis
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Genomic context

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See LOC116330517 in Genome Data Viewer
Location:
chromosome: 6
Exon count:
12
Annotation release Status Assembly LG Location
101 current ZZ_aureus (GCF_013358895.1) 6 NC_052947.1 (34686014..34689804)
100 previous assembly ASM587006v1 (GCF_005870065.1) Unplaced Scaffold NW_022245972.1 (2120555..2124040)

Linkage Group 6 - NC_052947.1Genomic Context describing neighboring genes Neighboring gene coiled-coil domain-containing protein 151-like Neighboring gene solute carrier family 44 member 2 (CTL2 blood group) Neighboring gene synaptonemal complex central element protein 2 Neighboring gene uncharacterized LOC120440653

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables fatty-acyl-CoA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables flavin adenine dinucleotide binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables glutaryl-CoA dehydrogenase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in fatty acid beta-oxidation using acyl-CoA dehydrogenase IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in fatty-acyl-CoA biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrial inner membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
glutaryl-CoA dehydrogenase, mitochondrial-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Oreochromis aureus Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ZZ_aureus Primary Assembly

Genomic

  1. NC_052947.1 Reference ZZ_aureus Primary Assembly

    Range
    34686014..34689804
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_039613011.1 → XP_039468945.1  glutaryl-CoA dehydrogenase, mitochondrial-like

    UniProtKB/TrEMBL
    A0A668UF47, A0A668UF82
    Related
    ENSOABP00000037011.1, ENSOABT00000038032.2
    Conserved Domains (1) summary
    cd01151
    Location:50 → 436
    GCD; Glutaryl-CoA dehydrogenase
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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Molecular Biology Databases