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ALG6 ALG6 alpha-1,3-glucosyltransferase [ Cygnus atratus (black swan) ]

Gene ID: 118256949, updated on 18-Sep-2024

Summary

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Gene symbol
ALG6
Gene description
ALG6 alpha-1,3-glucosyltransferase
See related
EnsemblRapid:ENSACYG00000009233
Gene type
protein coding
RefSeq status
MODEL
Organism
Cygnus atratus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Anseriformes; Anatidae; Anserinae; Cygnus
Orthologs
human mouse all
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Genomic context

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See ALG6 in Genome Data Viewer
Location:
chromosome: 8
Exon count:
15
Annotation release Status Assembly Chr Location
RS_2023_02 current CAtr_DNAZoo_HiC_assembly (GCF_013377495.2) 8 NC_066369.1 (30291273..30312420)
100 previous assembly Cygnus_atratus_primary_v1.0 (GCF_013377495.1) Unplaced Scaffold NW_023336675.1 (2720974..2742057, complement)

Chromosome 8 - NC_066369.1Genomic Context describing neighboring genes Neighboring gene autophagy related 4C cysteine peptidase Neighboring gene forkhead box D3 Neighboring gene integrin subunit beta 3 binding protein Neighboring gene EF-hand calcium binding domain 7

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables dolichyl pyrophosphate Man9GlcNAc2 alpha-1,3-glucosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein N-linked glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
dolichyl pyrophosphate Man9GlcNAc2 alpha-1,3-glucosyltransferase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_013377495.2-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference CAtr_DNAZoo_HiC_assembly Primary Assembly

Genomic

  1. NC_066369.1 Reference CAtr_DNAZoo_HiC_assembly Primary Assembly

    Range
    30291273..30312420
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_035564399.2 → XP_035420292.1  dolichyl pyrophosphate Man9GlcNAc2 alpha-1,3-glucosyltransferase

    Related
    ENSACYP00000015138.1
    Conserved Domains (1) summary
    pfam03155
    Location:14 → 485
    Alg6_Alg8; ALG6, ALG8 glycosyltransferase family
Nucleotide Protein
Heading Accession and Version

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