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glsb glutaminase b [ Scophthalmus maximus (turbot) ]

Gene ID: 118283059, updated on 20-Mar-2024

Summary

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Gene symbol
glsb
Gene description
glutaminase b
See related
EnsemblRapid:ENSSMAG00025008237
Gene type
protein coding
RefSeq status
MODEL
Organism
Scophthalmus maximus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Carangaria; Pleuronectiformes; Pleuronectoidei; Scophthalmidae; Scophthalmus
Orthologs
zebrafish all
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Genomic context

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See glsb in Genome Data Viewer
Location:
chromosome: 14
Exon count:
20
Annotation release Status Assembly Chr Location
101 current ASM2237912v1 (GCF_022379125.1) 14 NC_061528.1 (19755542..19801100)
100 previous assembly ASM1334776v1 (GCF_013347765.1) 14 NC_049701.1 (3431486..3477257, complement)

Chromosome 14 - NC_061528.1Genomic Context describing neighboring genes Neighboring gene O-sialoglycoprotein endopeptidase-like 1 Neighboring gene FKBP prolyl isomerase 7 Neighboring gene interleukin-10 receptor subunit beta Neighboring gene uncharacterized LOC118320594

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. High-throughput sequence analysis of turbot (Scophthalmus maximus) transcriptome using 454-pyrosequencing for the discovery of antiviral immune genes. Pereiro P, et al. PLoS One, 2012. PMID 22629298, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables glutaminase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in glutamate biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in glutamine catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
glutaminase kidney isoform, mitochondrial

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Scophthalmus maximus Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM2237912v1 Primary Assembly

Genomic

  1. NC_061528.1 Reference ASM2237912v1 Primary Assembly

    Range
    19755542..19801100
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_047337373.1 → XP_047193329.1  glutaminase kidney isoform, mitochondrial isoform X3

  2. XM_035604712.2 → XP_035460605.1  glutaminase kidney isoform, mitochondrial isoform X4

    Conserved Domains (2) summary
    pfam04960
    Location:218 → 460
    Glutaminase
    pfam17959
    Location:113 → 196
    EF-hand_14; EF-hand domain

  3. XM_035604710.2 → XP_035460603.1  glutaminase kidney isoform, mitochondrial isoform X1

    UniProtKB/TrEMBL
    A0A2U9CA45, A0A8D3B295
    Related
    ENSSMAP00025029288.1, ENSSMAT00025030432.1
    Conserved Domains (4) summary
    sd00045
    Location:531 → 557
    ANK; ANK repeat [structural motif]
    pfam04960
    Location:218 → 502
    Glutaminase
    pfam12796
    Location:531 → 613
    Ank_2; Ankyrin repeats (3 copies)
    pfam17959
    Location:113 → 196
    EF-hand_14; EF-hand domain

  4. XM_035604711.2 → XP_035460604.1  glutaminase kidney isoform, mitochondrial isoform X2

    UniProtKB/TrEMBL
    A0A2U9C7U5, A0A6A4RZU1
    Related
    ENSSMAP00025029281.1, ENSSMAT00025030425.1
    Conserved Domains (2) summary
    pfam04960
    Location:218 → 502
    Glutaminase
    pfam17959
    Location:113 → 196
    EF-hand_14; EF-hand domain

  5. XM_035604713.2 → XP_035460606.1  glutaminase kidney isoform, mitochondrial isoform X5

    Conserved Domains (3) summary
    sd00045
    Location:221 → 247
    ANK; ANK repeat [structural motif]
    pfam04960
    Location:16 → 192
    Glutaminase
    pfam12796
    Location:221 → 303
    Ank_2; Ankyrin repeats (3 copies)
Nucleotide Protein Strain
Heading Accession and Version

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