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fech ferrochelatase [ Nematolebias whitei (Rio pearlfish) ]

Gene ID: 119424374, updated on 21-Mar-2024

Summary

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Gene symbol
fech
Gene description
ferrochelatase
Gene type
protein coding
RefSeq status
MODEL
Organism
Nematolebias whitei
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Rivulidae; Nematolebias
Annotation information
Annotation category: partial on reference assembly
Orthologs
human zebrafish all
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Genomic context

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See fech in Genome Data Viewer
Location:
chromosome: 18
Exon count:
7
Annotation release Status Assembly Chr Location
100.20210725 current NemWhi1 (GCF_014905685.2) 18 NC_056515.1 (40438465..40442771)
100 previous assembly NemWhi1 (GCF_014905685.1) Unplaced Scaffold NW_023618563.1 (40438465..40442771)

Chromosome 18 - NC_056515.1Genomic Context describing neighboring genes Neighboring gene centrin 3 Neighboring gene one cut domain family member 2-like Neighboring gene E3 ubiquitin-protein ligase TRIM21-like Neighboring gene Voltage-dependent anion-selective channel protein 2-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ferrochelatase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in heme biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ferrochelatase, mitochondrial

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Nematolebias whitei Updated Annotation Release 100.20210725

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NemWhi1

Genomic

  1. NC_056515.1 Reference NemWhi1

    Range
    40438465..40442771
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_037691840.1 → XP_037547768.1  ferrochelatase, mitochondrial

    Conserved Domains (1) summary
    pfam00762
    Location:47 → 363
    Ferrochelatase
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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