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IQSEC3 IQ motif and Sec7 domain ArfGEF 3 [ Oryx dammah (scimitar-horned oryx) ]

Gene ID: 120857857, updated on 21-Mar-2024

Summary

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Gene symbol
IQSEC3
Gene description
IQ motif and Sec7 domain ArfGEF 3
Gene type
protein coding
RefSeq status
MODEL
Organism
Oryx dammah
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Hippotraginae; Oryx
Orthologs
human mouse all
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Genomic context

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See IQSEC3 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
15
Annotation release Status Assembly Chr Location
100 current SCBI_Odam_1.1 (GCF_014754425.2) Unplaced Scaffold NW_024070213.1 (12801712..12891157, complement)

NW_024070213.1Genomic Context describing neighboring genes Neighboring gene solute carrier family 6 member 13 Neighboring gene solute carrier family 6 member 12 Neighboring gene WASH complex subunit 1 Neighboring gene DEAD/H-box helicase 11

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_024070213 Unplaced Scaffold Reference SCBI_Odam_1.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables guanyl-nucleotide exchange factor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in actin cytoskeleton organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of ARF protein signal transduction IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
IQ motif and SEC7 domain-containing protein 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Oryx dammah Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference SCBI_Odam_1.1 Primary Assembly

Genomic

  1. NW_024070213.1 Reference SCBI_Odam_1.1 Primary Assembly

    Range
    12801712..12891157 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_040233706.1 → XP_040089640.1  IQ motif and SEC7 domain-containing protein 3 isoform X2

    Conserved Domains (5) summary
    PRK07764
    Location:110 → 569
    PRK07764; DNA polymerase III subunits gamma and tau; Validated
    PRK13108
    Location:430 → 568
    PRK13108; prolipoprotein diacylglyceryl transferase; Reviewed
    cd00171
    Location:651 → 839
    Sec7; Sec7 domain; Domain named after the S. cerevisiae SEC7 gene product. The Sec7 domain is the central domain of the guanine-nucleotide-exchange factors (GEFs) of the ADP-ribosylation factor family of small GTPases (ARFs) . It carries the exchange factor ...
    cd14686
    Location:32 → 63
    bZIP; Basic leucine zipper (bZIP) domain of bZIP transcription factors: a DNA-binding and dimerization domain
    cd13318
    Location:866 → 996
    PH_IQSEC; IQ motif and SEC7 domain-containing protein family Pleckstrin homology domain

  2. XM_040233705.1 → XP_040089639.1  IQ motif and SEC7 domain-containing protein 3 isoform X1

    Conserved Domains (3) summary
    PRK13108
    Location:136 → 274
    PRK13108; prolipoprotein diacylglyceryl transferase; Reviewed
    cd00171
    Location:357 → 545
    Sec7; Sec7 domain; Domain named after the S. cerevisiae SEC7 gene product. The Sec7 domain is the central domain of the guanine-nucleotide-exchange factors (GEFs) of the ADP-ribosylation factor family of small GTPases (ARFs) . It carries the exchange factor ...
    cd13318
    Location:572 → 702
    PH_IQSEC; IQ motif and SEC7 domain-containing protein family Pleckstrin homology domain

  3. XM_040233703.1 → XP_040089637.1  IQ motif and SEC7 domain-containing protein 3 isoform X1

    Conserved Domains (3) summary
    PRK13108
    Location:136 → 274
    PRK13108; prolipoprotein diacylglyceryl transferase; Reviewed
    cd00171
    Location:357 → 545
    Sec7; Sec7 domain; Domain named after the S. cerevisiae SEC7 gene product. The Sec7 domain is the central domain of the guanine-nucleotide-exchange factors (GEFs) of the ADP-ribosylation factor family of small GTPases (ARFs) . It carries the exchange factor ...
    cd13318
    Location:572 → 702
    PH_IQSEC; IQ motif and SEC7 domain-containing protein family Pleckstrin homology domain

  4. XM_040233704.1 → XP_040089638.1  IQ motif and SEC7 domain-containing protein 3 isoform X1

    Conserved Domains (3) summary
    PRK13108
    Location:136 → 274
    PRK13108; prolipoprotein diacylglyceryl transferase; Reviewed
    cd00171
    Location:357 → 545
    Sec7; Sec7 domain; Domain named after the S. cerevisiae SEC7 gene product. The Sec7 domain is the central domain of the guanine-nucleotide-exchange factors (GEFs) of the ADP-ribosylation factor family of small GTPases (ARFs) . It carries the exchange factor ...
    cd13318
    Location:572 → 702
    PH_IQSEC; IQ motif and SEC7 domain-containing protein family Pleckstrin homology domain
Nucleotide Protein
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