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LOC122291342 probable NAD(P)H dehydrogenase (quinone) FQR1-like 3 [ Carya illinoinensis ]

Gene ID: 122291342, updated on 7-Dec-2023

Summary

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Gene symbol
LOC122291342
Gene description
probable NAD(P)H dehydrogenase (quinone) FQR1-like 3
Locus tag
CIPAW_13G079400
Gene type
protein coding
RefSeq status
MODEL
Organism
Carya illinoinensis
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Juglandaceae; Carya
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Genomic context

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See LOC122291342 in Genome Data Viewer
Location:
chromosome: 13
Exon count:
6
Annotation release Status Assembly Chr Location
100 current C.illinoinensisPawnee_v1 (GCF_018687715.1) 13 NC_056764.1 (8441699..8445591, complement)

Chromosome 13 - NC_056764.1Genomic Context describing neighboring genes Neighboring gene UDP-glycosyltransferase 71K1-like Neighboring gene pleckstrin homology domain-containing protein 1 Neighboring gene anthranilate synthase alpha subunit 2, chloroplastic Neighboring gene 60S acidic ribosomal protein P0-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_056764.1 Chromosome 13 Reference C.illinoinensisPawnee_v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Transcriptomic Analysis Provides Insights into Grafting Union Development in Pecan (Carya illinoinensis). Mo Z, et al. Genes (Basel), 2018 Feb 5. PMID 29401757, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables FMN binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables NAD(P)H dehydrogenase (quinone) activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
probable NAD(P)H dehydrogenase (quinone) FQR1-like 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Carya illinoinensis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference C.illinoinensisPawnee_v1 Primary Assembly

Genomic

  1. NC_056764.1 Reference C.illinoinensisPawnee_v1 Primary Assembly

    Range
    8441699..8445591 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_043099026.1 → XP_042954960.1  probable NAD(P)H dehydrogenase (quinone) FQR1-like 3 isoform X1

    UniProtKB/TrEMBL
    A0A8T1NI15
    Conserved Domains (1) summary
    cl00438
    Location:4 → 201
    FMN_red; NADPH-dependent FMN reductase

  2. XM_043099024.1 → XP_042954958.1  probable NAD(P)H dehydrogenase (quinone) FQR1-like 3 isoform X1

    UniProtKB/TrEMBL
    A0A8T1NI15
    Conserved Domains (1) summary
    cl00438
    Location:4 → 201
    FMN_red; NADPH-dependent FMN reductase

  3. XM_043099029.1 → XP_042954963.1  probable NAD(P)H dehydrogenase (quinone) FQR1-like 3 isoform X2

    UniProtKB/TrEMBL
    A0A922ANZ2
    Conserved Domains (1) summary
    cl00438
    Location:1 → 182
    FMN_red; NADPH-dependent FMN reductase

  4. XM_043099027.1 → XP_042954961.1  probable NAD(P)H dehydrogenase (quinone) FQR1-like 3 isoform X1

    UniProtKB/TrEMBL
    A0A8T1NI15
    Conserved Domains (1) summary
    cl00438
    Location:4 → 201
    FMN_red; NADPH-dependent FMN reductase

  5. XM_043099028.1 → XP_042954962.1  probable NAD(P)H dehydrogenase (quinone) FQR1-like 3 isoform X1

    UniProtKB/TrEMBL
    A0A8T1NI15
    Conserved Domains (1) summary
    cl00438
    Location:4 → 201
    FMN_red; NADPH-dependent FMN reductase
Nucleotide Protein
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