U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

LOC122760627 glutaminase kidney isoform, mitochondrial-like [ Solea senegalensis (Senegalese sole) ]

Gene ID: 122760627, updated on 30-Nov-2023

Summary

Go to the top of the page Help
Gene symbol
LOC122760627
Gene description
glutaminase kidney isoform, mitochondrial-like
Locus tag
JOB18_029920
Gene type
protein coding
RefSeq status
MODEL
Organism
Solea senegalensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Carangaria; Pleuronectiformes; Pleuronectoidei; Soleidae; Solea
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See LOC122760627 in Genome Data Viewer
Location:
chromosome: LG2
Exon count:
19
Annotation release Status Assembly LG Location
100 current IFAPA_SoseM_1 (GCF_019176455.1) LG2 NC_058022.1 (33595465..33612386, complement)

Linkage Group LG2 - NC_058022.1Genomic Context describing neighboring genes Neighboring gene signal transducer and activator of transcription 1a Neighboring gene growth/differentiation factor 8-like Neighboring gene uncharacterized LOC122760643 Neighboring gene NGFI-A-binding protein 1-like Neighboring gene major facilitator superfamily domain-containing protein 6-like Neighboring gene leucine-rich repeat-containing protein 4C

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_058022.1 Chromosome LG2 Reference IFAPA_SoseM_1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables glutaminase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in glutamate biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in glutamine catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
glutaminase kidney isoform, mitochondrial-like

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Solea senegalensis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference IFAPA_SoseM_1 Primary Assembly

Genomic

  1. NC_058022.1 Reference IFAPA_SoseM_1 Primary Assembly

    Range
    33595465..33612386 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_044015760.1 → XP_043871695.1  glutaminase kidney isoform, mitochondrial-like isoform X2

    Conserved Domains (3) summary
    PTZ00322
    Location:520 → 601
    PTZ00322; 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional
    sd00045
    Location:516 → 542
    ANK; ANK repeat [structural motif]
    cl00907
    Location:190 → 475
    Glutaminase

  2. XM_044015753.1 → XP_043871688.1  glutaminase kidney isoform, mitochondrial-like isoform X1

    Conserved Domains (3) summary
    PTZ00322
    Location:522 → 603
    PTZ00322; 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional
    sd00045
    Location:518 → 544
    ANK; ANK repeat [structural motif]
    cl00907
    Location:192 → 477
    Glutaminase

  3. XM_044015769.1 → XP_043871704.1  glutaminase kidney isoform, mitochondrial-like isoform X3

    Conserved Domains (3) summary
    PTZ00322
    Location:277 → 358
    PTZ00322; 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional
    sd00045
    Location:273 → 299
    ANK; ANK repeat [structural motif]
    cl00907
    Location:62 → 232
    Glutaminase
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases