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LOC124877399 L-serine dehydratase/L-threonine deaminase-like [ Girardinichthys multiradiatus ]

Gene ID: 124877399, updated on 25-Jan-2024

Summary

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Gene symbol
LOC124877399
Gene description
L-serine dehydratase/L-threonine deaminase-like
See related
EnsemblRapid:ENSGMLG00005019359
Gene type
protein coding
RefSeq status
MODEL
Organism
Girardinichthys multiradiatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Goodeidae; Girardinichthys
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Genomic context

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See LOC124877399 in Genome Data Viewer
Location:
chromosome: 12
Exon count:
8
Annotation release Status Assembly Chr Location
100 current DD_fGirMul_XY1 (GCF_021462225.1) 12 NC_061805.1 (41220648..41226823)

Chromosome 12 - NC_061805.1Genomic Context describing neighboring genes Neighboring gene phosphatidylinositol transfer protein Neighboring gene tetratricopeptide repeat protein 28-like Neighboring gene probable E3 ubiquitin-protein ligase HECTD4 Neighboring gene group 3 secretory phospholipase A2-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_061805.1 Chromosome 12 Reference DD_fGirMul_XY1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables L-serine ammonia-lyase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables pyridoxal phosphate binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables threonine deaminase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in L-serine catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in threonine catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
L-serine dehydratase/L-threonine deaminase-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Girardinichthys multiradiatus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference DD_fGirMul_XY1

Genomic

  1. NC_061805.1 Reference DD_fGirMul_XY1

    Range
    41220648..41226823
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_047380540.1 → XP_047236496.1  L-serine dehydratase/L-threonine deaminase-like

    Related
    ENSGMLP00005034220.1, ENSGMLT00005034929.1

  2. XM_047380539.1 → XP_047236495.1  L-serine dehydratase/L-threonine deaminase-like

Nucleotide Protein
Heading Accession and Version

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Molecular Biology Databases