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SLC17A6 solute carrier family 17 member 6 [ Prionailurus viverrinus (fishing cat) ]

Gene ID: 125176830, updated on 22-Mar-2024

Summary

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Gene symbol
SLC17A6
Gene description
solute carrier family 17 member 6
Gene type
protein coding
RefSeq status
MODEL
Organism
Prionailurus viverrinus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Feliformia; Felidae; Felinae; Prionailurus
Orthologs
human mouse all
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Genomic context

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See SLC17A6 in Genome Data Viewer
Location:
chromosome: D1
Exon count:
12
Annotation release Status Assembly Chr Location
RS_2023_03 current UM_Priviv_1.0 (GCF_022837055.1) D1 NC_062570.1 (77943967..77983658)

Chromosome D1 - NC_062570.1Genomic Context describing neighboring genes Neighboring gene cofilin-1-like Neighboring gene anoctamin 5 Neighboring gene 60S ribosomal protein L14-like Neighboring gene uncharacterized LOC125177052

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_062570.1 Chromosome D1 Reference UM_Priviv_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables L-glutamate transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables neurotransmitter transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in monoatomic anion transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in neurotransmitter loading into synaptic vesicle IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of synapse structure or activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in synaptic transmission, glutamatergic IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in excitatory synapse IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in synaptic vesicle membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
vesicular glutamate transporter 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_022837055.1-RS_2023_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference UM_Priviv_1.0 Primary Assembly

Genomic

  1. NC_062570.1 Reference UM_Priviv_1.0 Primary Assembly

    Range
    77943967..77983658
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_047878704.1 → XP_047734660.1  vesicular glutamate transporter 2

Nucleotide Protein
Heading Accession and Version

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