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siz Brefeldin-resistant Arf-GEF family protein schizo [ Artemia franciscana ]

Gene ID: 136033249, updated on 1-Aug-2024

Summary

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Gene symbol
siz
Gene description
Brefeldin-resistant Arf-GEF family protein schizo
Locus tag
QYM36_000974
Gene type
protein coding
RefSeq status
MODEL
Organism
Artemia franciscana
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Crustacea; Branchiopoda; Anostraca; Artemiidae; Artemia
Orthologs
fruit fly all
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Genomic context

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See siz in Genome Data Viewer
Location:
chromosome: 11
Exon count:
21
Annotation release Status Assembly Chr Location
RS_2024_06 current ASM3288406v1 (GCF_032884065.1) 11 NC_088873.1 (42344152..42703617)

Chromosome 11 - NC_088873.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC136033246 Neighboring gene nuclear envelope phosphatase-regulatory subunit 1-like Neighboring gene serine/threonine-protein kinase NIM1-like Neighboring gene leptin receptor gene-related protein-like Neighboring gene transitional endoplasmic reticulum ATPase-like Neighboring gene transfer RNA glycine (anticodon GCC)

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_088873.1 Chromosome 11 Reference ASM3288406v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A Na pump with reduced stoichiometry is up-regulated by brine shrimp in extreme salinities. Artigas P, et al. Proc Natl Acad Sci U S A, 2023 Dec 26. PMID 38079564, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables guanyl-nucleotide exchange factor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in actin cytoskeleton organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of ARF protein signal transduction IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
IQ motif and SEC7 domain-containing protein 1-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_032884065.1-RS_2024_06

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM3288406v1 Primary Assembly

Genomic

  1. NC_088873.1 Reference ASM3288406v1 Primary Assembly

    Range
    42344152..42703617
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_065713973.1 → XP_065570045.1  IQ motif and SEC7 domain-containing protein 1-like isoform X1

  2. XM_065713984.1 → XP_065570056.1  IQ motif and SEC7 domain-containing protein 1-like isoform X6

    UniProtKB/TrEMBL
    A0AA88LF49

  3. XM_065713985.1 → XP_065570057.1  IQ motif and SEC7 domain-containing protein 1-like isoform X7

  4. XM_065713982.1 → XP_065570054.1  IQ motif and SEC7 domain-containing protein 1-like isoform X4

  5. XM_065713974.1 → XP_065570046.1  IQ motif and SEC7 domain-containing protein 1-like isoform X2

    UniProtKB/TrEMBL
    A0AA88LBH8

  6. XM_065713976.1 → XP_065570048.1  IQ motif and SEC7 domain-containing protein 1-like isoform X2

    UniProtKB/TrEMBL
    A0AA88LBH8

  7. XM_065713986.1 → XP_065570058.1  IQ motif and SEC7 domain-containing protein 1-like isoform X8

  8. XM_065713975.1 → XP_065570047.1  IQ motif and SEC7 domain-containing protein 1-like isoform X2

    UniProtKB/TrEMBL
    A0AA88LBH8

  9. XM_065713983.1 → XP_065570055.1  IQ motif and SEC7 domain-containing protein 1-like isoform X5

  10. XM_065713977.1 → XP_065570049.1  IQ motif and SEC7 domain-containing protein 1-like isoform X3

    UniProtKB/TrEMBL
    A0AA88LHL2

  11. XM_065713979.1 → XP_065570051.1  IQ motif and SEC7 domain-containing protein 1-like isoform X3

    UniProtKB/TrEMBL
    A0AA88LHL2

  12. XM_065713980.1 → XP_065570052.1  IQ motif and SEC7 domain-containing protein 1-like isoform X3

    UniProtKB/TrEMBL
    A0AA88LHL2

  13. XM_065713981.1 → XP_065570053.1  IQ motif and SEC7 domain-containing protein 1-like isoform X3

    UniProtKB/TrEMBL
    A0AA88LHL2
Nucleotide Protein
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