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ACOX2 acyl-CoA oxidase 2 [ Sylvia atricapilla (blackcap) ]

Gene ID: 136365867, updated on 31-Jul-2024

Summary

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Gene symbol
ACOX2
Gene description
acyl-CoA oxidase 2
See related
EnsemblRapid:ENSSATG00000001467
Gene type
protein coding
RefSeq status
MODEL
Organism
Sylvia atricapilla
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Sylvioidea; Sylviidae; Sylviinae; Sylvia
Orthologs
human mouse all
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Genomic context

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See ACOX2 in Genome Data Viewer
Location:
chromosome: 11
Exon count:
15
Annotation release Status Assembly Chr Location
RS_2024_07 current bSylAtr1.pri (GCF_009819655.1) 11 NC_089150.1 (9149085..9166723)

Chromosome 11 - NC_089150.1Genomic Context describing neighboring genes Neighboring gene FAM3 metabolism regulating signaling molecule D Neighboring gene family with sequence similarity 107 member A Neighboring gene uncharacterized LOC136365872 Neighboring gene potassium channel tetramerization domain containing 6 Neighboring gene pyruvate dehydrogenase E1 subunit beta

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_089150.1 Chromosome 11 Reference bSylAtr1.pri Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables 3alpha,7alpha,12alpha-trihydroxy-5beta-cholestanoyl-CoA 24-hydroxylase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables FAD binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables fatty acid binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables palmitoyl-CoA oxidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in fatty acid beta-oxidation using acyl-CoA oxidase IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in lipid homeostasis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in very long-chain fatty acid metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in peroxisome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
peroxisomal acyl-coenzyme A oxidase 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_009819655.1-RS_2024_07

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bSylAtr1.pri Primary Assembly

Genomic

  1. NC_089150.1 Reference bSylAtr1.pri Primary Assembly

    Range
    9149085..9166723
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_066326528.1 → XP_066182625.1  peroxisomal acyl-coenzyme A oxidase 2

    Related
    ENSSATP00000002300.1, ENSSATT00000002337.1
Nucleotide Protein
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