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LOC18033084 berberine bridge enzyme-like 13 [ Citrus x clementina ]

Gene ID: 18033084, updated on 21-Dec-2023

Summary

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Gene symbol
LOC18033084
Gene description
berberine bridge enzyme-like 13
Locus tag
CICLE_v10007008mg
Gene type
protein coding
RefSeq status
MODEL
Organism
Citrus x clementina
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
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Genomic context

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See LOC18033084 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
1
Annotation release Status Assembly Chr Location
100 current Citrus_clementina_v1.0 (GCF_000493195.1) Unplaced Scaffold NW_006261964.1 (26251378..26253003, complement)

NW_006261964.1Genomic Context describing neighboring genes Neighboring gene putative lipase YOR059C Neighboring gene berberine bridge enzyme-like 15 Neighboring gene berberine bridge enzyme-like 15 Neighboring gene berberine bridge enzyme-like 15

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_006261964 Unplaced Scaffold Reference Citrus_clementina_v1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables FAD binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables oxidoreductase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
berberine bridge enzyme-like 13

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Citrus clementina Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Citrus_clementina_v1.0

Genomic

  1. NW_006261964.1 Reference Citrus_clementina_v1.0

    Range
    26251378..26253003 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006421477.1 → XP_006421540.1  berberine bridge enzyme-like 13

    See identical proteins and their annotated locations for XP_006421540.1

    UniProtKB/TrEMBL
    V4S7I1
    Conserved Domains (3) summary
    COG0277
    Location:77 → 529
    GlcD; FAD/FMN-containing dehydrogenase [Energy production and conversion]
    pfam01565
    Location:77 → 216
    FAD_binding_4; FAD binding domain
    pfam08031
    Location:470 → 527
    BBE; Berberine and berberine like
Nucleotide Protein
Heading Accession and Version

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