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HPODL_04064 Target of rapamycin complex subunit LST8 [ Ogataea parapolymorpha DL-1 ]

Gene ID: 25773495, updated on 30-Dec-2023

Summary

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Gene symbol
HPODL_04064
Gene description
Target of rapamycin complex subunit LST8
Locus tag
HPODL_04064
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Ogataea parapolymorpha DL-1 (strain: DL-1, type-material: holotype of Candida parapolymorpha)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Pichiaceae; Ogataea
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Genomic context

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See HPODL_04064 in Genome Data Viewer
Location:
chromosome: V
Exon count:
1
Sequence:
Chromosome: V; NC_027862.1 (535457..536365, complement)

Chromosome V - NC_027862.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene tRNA-Ser Neighboring gene Protein SIS1 Neighboring gene Reduced viability upon starvation protein 161

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_027862.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in TOR signaling IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of actin cytoskeleton organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of TORC1 complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of TORC2 complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
Target of rapamycin complex subunit LST8

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_027862.1 Reference assembly

    Range
    535457..536365 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_014078845.1 → XP_013934320.1  Target of rapamycin complex subunit LST8 [Ogataea parapolymorpha DL-1]

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    W1QBP2
    Conserved Domains (2) summary
    cd00200
    Location:4 → 277
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
    sd00039
    Location:36 → 73
    7WD40; WD40 repeat [structural motif]
Nucleotide Protein
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