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A1Q1_07191 hypothetical protein [ Trichosporon asahii var. asahii CBS 2479 ]

Gene ID: 25990703, updated on 17-May-2024

Summary

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Gene symbol
A1Q1_07191
Gene description
hypothetical protein
Locus tag
A1Q1_07191
See related
FungiDB:A1Q1_07191; VEuPathDB:A1Q1_07191
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Trichosporon asahii var. asahii CBS 2479 (strain: CBS 2479, variety: asahii, culture-collection: CBS:2479, type-material: culture from type material of Trichosporon asahii)
Lineage
Eukaryota; Fungi; Dikarya; Basidiomycota; Agaricomycotina; Tremellomycetes; Trichosporonales; Trichosporonaceae; Trichosporon
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Genomic context

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See A1Q1_07191 in Genome Data Viewer
Location:
chromosome: Unknown
Exon count:
1

NW_014040915.1Genomic Context describing neighboring genes Neighboring gene inorganic diphosphatase Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_014040915.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Draft genome sequence of CBS 2479, the standard type strain of Trichosporon asahii. Yang RY, et al. Eukaryot Cell, 2012 Nov. PMID 23104369, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables dihydroorotate dehydrogenase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in 'de novo' pyrimidine nucleobase biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in pyrimidine nucleotide biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
hypothetical protein

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NW_014040915.1 Reference assembly

    Range
    1104083..1105027 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_014327427.1 → XP_014182902.1  hypothetical protein A1Q1_07191 [Trichosporon asahii var. asahii CBS 2479]

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    J5RAQ3, K1WPE6
    Conserved Domains (1) summary
    cd04741
    Location:2 → 314
    DHOD_1A_like; Dihydroorotate dehydrogenase (DHOD) class 1A FMN-binding domain. DHOD catalyzes the oxidation of (S)-dihydroorotate to orotate. This is the fourth step and the only redox reaction in the de novo biosynthesis of UMP, the precursor of all pyrimidine ...
Nucleotide Protein
Heading Accession and Version

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