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VFPPC_10141 copper amine oxidase [ Pochonia chlamydosporia 170 ]

Gene ID: 28852556, updated on 18-Sep-2024

Summary

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Gene symbol
VFPPC_10141
Gene description
copper amine oxidase
Locus tag
VFPPC_10141
Gene type
protein coding
RNA name
copper amine oxidase
RefSeq status
PROVISIONAL
Organism
Pochonia chlamydosporia 170 (isolate: 170)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Sordariomycetes; Hypocreomycetidae; Hypocreales; Clavicipitaceae; Pochonia
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Genomic context

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See VFPPC_10141 in Genome Data Viewer
Location:
chromosome: Unknown
Exon count:
5

NW_019154045.1Genomic Context describing neighboring genes Neighboring gene amino acid transporter Neighboring gene phytanoyl- dioxygenase protein Neighboring gene fungal specific transcription factor domain-containing protein Neighboring gene fungal zn(2)-Cys(6) binuclear cluster domain-containing protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_019154045.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Biosynthesis of Antibiotic Leucinostatins in Bio-control Fungus Purpureocillium lilacinum and Their Inhibition on Phytophthora Revealed by Genome Mining. Wang G, et al. PLoS Pathog, 2016 Jul. PMID 27416025, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables copper ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables primary methylamine oxidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables quinone binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in amine metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Names
copper amine oxidase
XP_018137161.1
  • similar to Coccidioides immitis RS XP_001246445.1

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NW_019154045.1 Reference assembly

    Range
    665444..667768
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_018288562.1 → XP_018137161.1  copper amine oxidase [Pochonia chlamydosporia 170]

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A179F0Y3
Nucleotide Protein
Heading Accession and Version

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Molecular Biology Databases