U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

EGR_06080 Target of rapamycin complex subunit lst8 [ Echinococcus granulosus ]

Gene ID: 36341795, updated on 22-Oct-2023

Summary

Go to the top of the page Help
Gene symbol
EGR_06080
Gene description
Target of rapamycin complex subunit lst8
Locus tag
EGR_06080
Gene type
protein coding
RNA name
Target of rapamycin complex subunit lst8
RefSeq status
PROVISIONAL
Organism
Echinococcus granulosus
Lineage
Eukaryota; Metazoa; Spiralia; Lophotrochozoa; Platyhelminthes; Cestoda; Eucestoda; Cyclophyllidea; Taeniidae; Echinococcus; Echinococcus granulosus group
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See EGR_06080 in Genome Data Viewer
Location:
chromosome: Unknown
Exon count:
4

NW_020170430.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene Ras-related protein Rab-7a Neighboring gene E3 ubiquitin-protein ligase Neighboring gene Zinc finger and BTB domain-containing protein 24

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NW_020170430.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. The genome of the hydatid tapeworm Echinococcus granulosus. Zheng H, et al. Nat Genet, 2013 Oct. PMID 24013640
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in TOR signaling IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of actin cytoskeleton organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of TORC1 complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of TORC2 complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
Target of rapamycin complex subunit lst8

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NW_020170430.1 Reference assembly

    Range
    442837..444618
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_024495329.1 → XP_024350284.1  Target of rapamycin complex subunit lst8 [Echinococcus granulosus]

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    U6JA79
    Conserved Domains (2) summary
    sd00039
    Location:43 → 79
    7WD40; WD40 repeat [structural motif]
    cl25539
    Location:12 → 289
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
CDS20233.1

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases