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CCN1 cellular communication network factor 1 [ Bos taurus (domestic cattle) ]

Gene ID: 508941, updated on 4-Oct-2024

Summary

Official Symbol
CCN1provided by VGNC
Official Full Name
cellular communication network factor 1provided by VGNC
Primary source
VGNC:VGNC:50270
See related
BGD:BT15906; Ensembl:ENSBTAG00000009844
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Bos taurus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
Also known as
GIG1; CYR61
Orthologs
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Genomic context

See CCN1 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
5
Annotation release Status Assembly Chr Location
RS_2023_09 current ARS-UCD2.0 (GCF_002263795.3) 3 NC_037330.1 (58488393..58491302, complement)

Chromosome 3 - NC_037330.1Genomic Context describing neighboring genes Neighboring gene collagen type XXIV alpha 1 chain Neighboring gene transcription factor Spi-C-like Neighboring gene uncharacterized LOC101904498 Neighboring gene zinc finger HIT-type containing 6 Neighboring gene uncharacterized LOC101904769 Neighboring gene DDB1- and CUL4-associated factor 16-like Neighboring gene dimethylarginine dimethylaminohydrolase 1

Genomic regions, transcripts, and products

Genomic Sequence:
NC_037330.1 Chromosome 3 Reference ARS-UCD2.0 Primary Assembly

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Pathways from PubChem

General gene information

Clone Names

  • MGC128088

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
PubMed 
Process Evidence Code Pubs
involved_in signal transduction IEA
Inferred from Electronic Annotation
more info
PubMed 
Component Evidence Code Pubs
located_in extracellular region IEA
Inferred from Electronic Annotation
more info
PubMed 

General protein information

Preferred Names
CCN family member 1
Names
cysteine rich angiogenic inducer 61
cysteine-rich heparin-binding protein 61

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001034340.2NP_001029512.1  CCN family member 1 precursor

    See identical proteins and their annotated locations for NP_001029512.1

    Status: PROVISIONAL

    Source sequence(s)
    BC102934
    UniProtKB/TrEMBL
    A0A3Q1LRR3, Q3ZC35
    Related
    ENSBTAP00000012977.3, ENSBTAT00000012977.5
    Conserved Domains (4) summary
    smart00209
    Location:233273
    TSP1; Thrombospondin type 1 repeats
    smart00214
    Location:100159
    VWC; von Willebrand factor (vWF) type C domain
    pfam00219
    Location:2678
    IGFBP; Insulin-like growth factor binding protein
    cl21545
    Location:294376
    GHB_like; Glycoprotein hormone beta chain homologues

RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2023_09

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ARS-UCD2.0 Primary Assembly

Genomic

  1. NC_037330.1 Reference ARS-UCD2.0 Primary Assembly

    Range
    58488393..58491302 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)