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BID BH3 interacting domain death agonist [ Bos taurus (domestic cattle) ]

Gene ID: 510373, updated on 14-Nov-2024

Summary

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Official Symbol
BIDprovided by VGNC
Official Full Name
BH3 interacting domain death agonistprovided by VGNC
Primary source
VGNC:VGNC:26496
See related
BGD:BT14213; Ensembl:ENSBTAG00000013988
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Bos taurus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
Orthologs
human mouse all
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Genomic context

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See BID in Genome Data Viewer
Location:
chromosome: 5
Exon count:
8
Annotation release Status Assembly Chr Location
RS_2023_09 current ARS-UCD2.0 (GCF_002263795.3) 5 NC_037332.1 (109133402..109154398, complement)

Chromosome 5 - NC_037332.1Genomic Context describing neighboring genes Neighboring gene ATPase H+ transporting V1 subunit E1 Neighboring gene transfer RNA glutamic acid (anticodon UUC) Neighboring gene BCL2 like 13 Neighboring gene transfer RNA serine (anticodon GGA) Neighboring gene microtubule associated monooxygenase, calponin and LIM domain containing 3 Neighboring gene uncharacterized LOC132345352

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_037332.1 Chromosome 5 Reference ARS-UCD2.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

Pathways from PubChem

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General gene information

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Homology

Clone Names

  • MGC140420

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in apoptotic mitochondrial changes IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of extrinsic apoptotic signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of intrinsic apoptotic signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of release of cytochrome c from mitochondria IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
BH3-interacting domain death agonist

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001075446.2 → NP_001068914.1  BH3-interacting domain death agonist

    See identical proteins and their annotated locations for NP_001068914.1

    Status: PROVISIONAL

    Source sequence(s)
    BC118359
    UniProtKB/TrEMBL
    Q17QH5
    Conserved Domains (1) summary
    pfam06393
    Location:4 → 190
    BID; BH3 interacting domain (BID)

RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2023_09

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ARS-UCD2.0 Primary Assembly

Genomic

  1. NC_037332.1 Reference ARS-UCD2.0 Primary Assembly

    Range
    109133402..109154398 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_024991595.2 → XP_024847363.1  BH3-interacting domain death agonist isoform X5

    UniProtKB/TrEMBL
    Q05KI6
    Related
    ENSBTAP00000091789.1, ENSBTAT00000096242.1
    Conserved Domains (1) summary
    pfam06393
    Location:4 → 190
    BID; BH3 interacting domain (BID)

  2. XM_059886268.1 → XP_059742251.1  BH3-interacting domain death agonist isoform X3

  3. XM_059886267.1 → XP_059742250.1  BH3-interacting domain death agonist isoform X2

  4. XM_059886266.1 → XP_059742249.1  BH3-interacting domain death agonist isoform X1

    UniProtKB/TrEMBL
    F6QP63
    Related
    ENSBTAP00000040367.4, ENSBTAT00000042737.5

  5. XM_005207316.5 → XP_005207373.1  BH3-interacting domain death agonist isoform X4

    See identical proteins and their annotated locations for XP_005207373.1

    UniProtKB/TrEMBL
    Q17QH5
    Conserved Domains (1) summary
    pfam06393
    Location:4 → 190
    BID; BH3 interacting domain (BID)

  6. XM_059886270.1 → XP_059742253.1  BH3-interacting domain death agonist isoform X4

    UniProtKB/TrEMBL
    Q17QH5

  7. XM_059886269.1 → XP_059742252.1  BH3-interacting domain death agonist isoform X4

    UniProtKB/TrEMBL
    Q17QH5
Nucleotide Protein Strain
Heading Accession and Version

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