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LOC8068759 putative cytochrome c oxidase subunit 5b-like [ Sorghum bicolor (sorghum) ]

Gene ID: 8068759, updated on 18-Sep-2024

Summary

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Gene symbol
LOC8068759
Gene description
putative cytochrome c oxidase subunit 5b-like
Locus tag
SORBI_3010G032600
Gene type
protein coding
RefSeq status
MODEL
Organism
Sorghum bicolor
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Sorghinae; Sorghum
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Genomic context

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See LOC8068759 in Genome Data Viewer
Location:
chromosome: 10
Exon count:
6
Annotation release Status Assembly Chr Location
101 current Sorghum_bicolor_NCBIv3 (GCF_000003195.3) 10 NC_012879.2 (2598102..2600838, complement)

Chromosome 10 - NC_012879.2Genomic Context describing neighboring genes Neighboring gene mitotic checkpoint protein BUB3.1 Neighboring gene probable receptor-like protein kinase At5g20050 Neighboring gene protein arginine N-methyltransferase PRMT10 Neighboring gene baicalein 7-O-glucuronosyltransferase Neighboring gene uncharacterized LOC8070719

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_012879.2 Chromosome 10 Reference Sorghum_bicolor_NCBIv3 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in mitochondrial electron transport, cytochrome c to oxygen IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrial envelope IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
putative cytochrome c oxidase subunit 5b-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Sorghum bicolor Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Sorghum_bicolor_NCBIv3 Primary Assembly

Genomic

  1. NC_012879.2 Reference Sorghum_bicolor_NCBIv3 Primary Assembly

    Range
    2598102..2600838 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002437764.2 → XP_002437809.1  putative cytochrome c oxidase subunit 5b-like

    See identical proteins and their annotated locations for XP_002437809.1

    UniProtKB/TrEMBL
    A0A921Q221, C5Z3U6
    Conserved Domains (1) summary
    cl00016
    Location:1 → 153
    Cyt_c_Oxidase_Vb; Cytochrome c oxidase subunit Vb. Cytochrome c oxidase (CcO), the terminal oxidase in the respiratory chains of eukaryotes and most bacteria, is a multi-chain transmembrane protein located in the inner membrane of mitochondria and the cell membrane of ...
Nucleotide Protein
Heading Accession and Version

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