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LOC9657521 copper methylamine oxidase [ Selaginella moellendorffii ]

Gene ID: 9657521, updated on 18-Sep-2024

Summary

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Gene symbol
LOC9657521
Gene description
copper methylamine oxidase
Locus tag
SELMODRAFT_443642
Gene type
protein coding
RefSeq status
MODEL
Organism
Selaginella moellendorffii
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Lycopodiopsida; Selaginellales; Selaginellaceae; Selaginella
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Genomic context

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See LOC9657521 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
13
Annotation release Status Assembly Chr Location
100 current v1.0 (GCF_000143415.4) Unplaced Scaffold NW_003314296.1 (812248..815890, complement)

NW_003314296.1Genomic Context describing neighboring genes Neighboring gene non-specific lipid-transfer protein Neighboring gene probable plastidic glucose transporter 2 Neighboring gene U5 small nuclear ribonucleoprotein 40 kDa protein pseudogene Neighboring gene RING-H2 finger protein ATL16-like Neighboring gene pentatricopeptide repeat-containing protein At3g53360, mitochondrial

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_003314296 Unplaced Scaffold Reference v1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables copper ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables primary methylamine oxidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables quinone binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in amine metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
uncharacterized protein LOC9657521

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Selaginella moellendorffii Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference v1.0

Genomic

  1. NW_003314296.1 Reference v1.0

    Range
    812248..815890 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_024682754.1 → XP_024538522.1  uncharacterized protein LOC9657521 isoform X2

    UniProtKB/TrEMBL
    D8S826

  2. XM_002977823.2 → XP_002977869.1  uncharacterized protein LOC9657521 isoform X1

    See identical proteins and their annotated locations for XP_002977869.1

    UniProtKB/TrEMBL
    D8S358, D8S826
    Conserved Domains (2) summary
    cl27364
    Location:29 → 111
    Transketolase_C; Transketolase, C-terminal domain
    cl27386
    Location:77 → 774
    Cu_amine_oxid; Copper amine oxidase, enzyme domain

  3. XM_024682753.1 → XP_024538521.1  uncharacterized protein LOC9657521 isoform X1

    UniProtKB/TrEMBL
    D8S358, D8S826

  4. XM_024682752.1 → XP_024538520.1  uncharacterized protein LOC9657521 isoform X1

    UniProtKB/TrEMBL
    D8S358, D8S826

  5. XM_024682751.1 → XP_024538519.1  uncharacterized protein LOC9657521 isoform X1

    UniProtKB/TrEMBL
    D8S358, D8S826
Nucleotide Protein
Heading Accession and Version

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