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LOC123537357 cytosolic non-specific dipeptidase-like [ Mercenaria mercenaria ]

Gene ID: 123537357, updated on 23-Nov-2023

Summary

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Gene symbol
LOC123537357
Gene description
cytosolic non-specific dipeptidase-like
See related
EnsemblRapid:LOC123537357
Gene type
protein coding
RefSeq status
MODEL
Organism
Mercenaria mercenaria
Lineage
Eukaryota; Metazoa; Spiralia; Lophotrochozoa; Mollusca; Bivalvia; Autobranchia; Heteroconchia; Euheterodonta; Imparidentia; Neoheterodontei; Venerida; Veneroidea; Veneridae; Mercenaria
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Genomic context

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See LOC123537357 in Genome Data Viewer
Location:
chromosome: 17
Exon count:
14
Annotation release Status Assembly Chr Location
RS_2023_01 current MADL_Memer_1 (GCF_021730395.1) 17 NC_069377.1 (58759976..58790475)
100.20221206 previous assembly ASM1480567v1.1 (GCF_014805675.1) 16 NC_059320.1 (15357972..15388460, complement)

Chromosome 17 - NC_069377.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC128550023 Neighboring gene uncharacterized LOC123530855 Neighboring gene glucoside xylosyltransferase 2-like Neighboring gene glucoside xylosyltransferase 2-like Neighboring gene ankyrin repeat domain-containing protein 49-like Neighboring gene putative GTP-binding protein 6

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables metallodipeptidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in proteolysis IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
cytosolic non-specific dipeptidase-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_021730395.1-RS_2023_01

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference MADL_Memer_1 Primary Assembly

Genomic

  1. NC_069377.1 Reference MADL_Memer_1 Primary Assembly

    Range
    58759976..58790475
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_045321047.2 → XP_045176982.2  cytosolic non-specific dipeptidase-like isoform X2

  2. XM_045321046.2 → XP_045176981.2  cytosolic non-specific dipeptidase-like isoform X1

Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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Molecular Biology Databases