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    LOC121751746 L-ascorbate oxidase homolog [ Salvia splendens ]

    Gene ID: 121751746, updated on 7-Dec-2023

    Summary

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    Gene symbol
    LOC121751746
    Gene description
    L-ascorbate oxidase homolog
    Locus tag
    SASPL_127452
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Salvia splendens
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Mentheae; Salviinae; Salvia; Salvia subgen. Calosphace; core Calosphace
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    Genomic context

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    See LOC121751746 in Genome Data Viewer
    Location:
    chromosome: 10
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    100 current SspV2 (GCF_004379255.1) 10 NC_056041.1 (1056208..1059236, complement)

    Chromosome 10 - NC_056041.1Genomic Context describing neighboring genes Neighboring gene protein LUTEIN DEFICIENT 5, chloroplastic-like Neighboring gene brefeldin A-inhibited guanine nucleotide-exchange protein 5-like Neighboring gene protease Do-like 10, mitochondrial Neighboring gene endoglucanase 12-like

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_056041.1 Chromosome 10 Reference SspV2 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables copper ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables oxidoreductase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    L-ascorbate oxidase homolog

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Salvia splendens Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference SspV2 Primary Assembly

    Genomic

    1. NC_056041.1 Reference SspV2 Primary Assembly

      Range
      1056208..1059236 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_042146540.1 → XP_042002474.1  L-ascorbate oxidase homolog

      UniProtKB/TrEMBL
      A0A8X8XAX0
      Conserved Domains (1) summary
      PLN02354
      Location:19 → 555
      PLN02354; copper ion binding / oxidoreductase
    Nucleotide Protein
    Heading Accession and Version

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