| ID: | LLD 2.0 |
|---|---|
| Description: | Linked Life Data is a semantic data integration platform for the biomedical domain. |
| Number of statements: | 10,192,505,364 |
| Number of expl. statements: | 6,706,216,217 |
| Number of entities: | 1,553,620,636 |
| Data source | Named graph | Load date | Statements | Instances type |
|---|---|---|---|---|
| BioGRID ReferenceLicense | http://linkedlifedata.com/resource/biogrid | 2012.07.20 | 14,327,672 | biopax-2:entity |
| CellMap ReferenceLicense | http://linkedlifedata.com/resource/cellmap | 2012.07.20 | 154,863 | biopax-2:biochemicalReaction |
| ChEBI ReferenceLicense | http://linkedlifedata.com/resource/chebi | 2012.09.12 | 475,638 | skos:Concept |
| ChEMBL ReferenceLicense | http://linkedlifedata.com/resource/chembl | 2012.11.21 | 172,179,641 | chembl:ChemicalCompound |
| ClinicalTrials ReferenceLicense | http://linkedlifedata.com/resource/clinicaltrials | 2013.01.02 | 25,762,568 | clinicaltrials:ClinicalStudy |
| DailyMed ReferenceLicense | http://linkedlifedata.com/resource/dailymed | 2012.07.20 | 162,972 | dailymed:drugs |
| DiseaseOntology ReferenceLicense | http://linkedlifedata.com/resource/diseaseontology | 2012.07.20 | 91,006 | skos:Concept |
| Diseasome ReferenceLicense | http://linkedlifedata.com/resource/diseasome | 2012.07.20 | 72,445 | diseasome:diseases |
| DrugBank ReferenceLicense | http://linkedlifedata.com/resource/drugbank | 2012.12.12 | 1,039,959 | drugbank:Drug |
| GeneOntology ReferenceLicense | http://linkedlifedata.com/resource/geneontology | 2012.12.12 | 352,686 | skos:Concept |
| HapMap ReferenceLicense | http://linkedlifedata.com/resource/hapmap | 2012.07.20 | 22,462,178 | |
| HomoloGene ReferenceLicense | http://linkedlifedata.com/resource/homologene | 2012.09.12 | 29,435,724 | homologene:Group |
| HPRD ReferenceLicense | http://linkedlifedata.com/resource/hprd | 2013.01.02 | 1,972,499 | biopax-3:entity |
| HumanCYC ReferenceLicense | http://linkedlifedata.com/resource/humancyc | 2013.01.02 | 332,828 | biopax-3:entity |
| HumanPhenotypeOntology ReferenceLicense | http://linkedlifedata.com/resource/phenotype | 2012.09.12 | 66,099 | skos:Concept |
| IMID ReferenceLicense | http://linkedlifedata.com/resource/imid | 2012.07.20 | 117,675 | biopax-2:entity |
| IntAct ReferenceLicense | http://linkedlifedata.com/resource/intact | 2013.01.02 | 2,162,042 | biopax3:MolecularInteraction |
| MINT ReferenceLicense | http://linkedlifedata.com/resource/mint | 2013.01.02 | 8,982,264 | biopax-3:entity |
| NCBI Gene ReferenceLicense | http://linkedlifedata.com/resource/entrezgene | 2012.12.13 | 235,976,573 | entrezgene:Gene |
| NCI Nature ReferenceLicense | http://linkedlifedata.com/resource/nci-nature | 2013.01.02 | 914,442 | biopax-3:entity |
| PathwayCommons2 BioPax level-3 datasources ReferenceLicense | http://linkedlifedata.com/resource/biopax3 | 2013.01.02 | 6,087,970 | http://www.biopax.org/release/biopax-level3.owl#Pathway |
| PDB ReferenceLicense | http://linkedlifedata.com/resource/pdb | 2012.10.23 | 10,442,629 | pdb:Structure |
| Pfam ReferenceLicense | http://linkedlifedata.com/resource/pfam | 2012.10.23 | 56,181,920 | pfam:Family |
| Pfam-A ReferenceLicense | http://linkedlifedata.com/resource/pfam-a | 2012.10.23 | 3,267,518 | pfam:ProteinSequence |
| Pfam-B ReferenceLicense | http://linkedlifedata.com/resource/pfam-b | 2012.10.23 | 18,122,454 | pfam:ProteinSequence |
| PubMed ReferenceLicense | http://linkedlifedata.com/resource/pubmed | 2012.07.20 | 1,454,405,726 | pubmed:Citation |
| Reactome ReferenceLicense | http://linkedlifedata.com/resource/reactome | 2013.01.02 | 1,082,499 | biopax-3:entity |
| RxNorm ReferenceLicense | http://linkedlifedata.com/resource/rxnorm | 2012.11.27 | 13,286,198 | skos:Concept |
| SIDER ReferenceLicense | http://linkedlifedata.com/resource/sider | 2012.11.02 | 4,054,800 | sider:Drug |
| SymptomOntology ReferenceLicense | http://linkedlifedata.com/resource/symptom | 2012.07.20 | 5,210 | skos:Concept |
| UMLS ReferenceLicense | http://linkedlifedata.com/resource/umls | 2012.12.06 | 91,851,975 | skos:Concept |
| UniProt ReferenceLicense | http://linkedlifedata.com/resource/uniprot | 2012.11.28 | 4,165,135,149 | uniprot:Protein |
| Source dataset | Destination dataset | Linked Data Mapping Rule | Number of connections | Semantic relationship |
|---|---|---|---|---|
| BioPax proteins | NCBI-Gene genes | Reference node | 907 | skos:closeMatch |
| BioPax proteins | UniProt proteins | Reference Node | 1,220 | skos:relatedMatch |
| Diseasome genes | NCBI-Gene genes | Reference Node | 1,776 | skos:relatedMatch |
| DrugBank targets | UniProt proteins | Namespace Mapping | 4,660 | skos:exactMatch |
| DrugBank targets | NCBI-Gene genes | Namespace Mapping | 1,617 | skos:relatedMatch |
| HGNC genes | NCBI-Gene genes | Namespace mapping | 27,558 | skos:exactMatch |
| Homologene | NCBI Gene | Namespace mapping | 203,525 | skos:exactMatch |
| HUGO citations | PubMed citations | Namespace Mapping | 15,039 | skos:relatedMatch |
| HUGO Genes | UniProt proteins | Namespace Mapping | 18,996 | skos:relatedMatch |
| LHGDN association | UMLS concepts | Namespace Mapping | 63,148 | lhgdn:umls_code |
| NCBI-Gene organisms | UMLS organisms | Mismatched Identifiers | 6,720 | skos:exactMatch |
| PDB | UniProt | Reference node | 16,944 | skos:exactMatch |
| Pfam | PDB | Reference node | 5,357 | skos:closeMatch |
| PubMed Mesh terms | UMLS Mesh terms | Value Dereference | 25,969 | skos:exactMatch |
| RxNorm | UMLS | Reference node | 25,581 | skos:exactMatch |
| SIDER drugs | UMLS drug records | Namespace Mapping | 1,684 | skos:exactMatch |
| UniProt organisms | UMLS organism records | Value Dereference | 634,181 | skos:exactMatch |
| UniProt proteins | UMLS protein records | Reference Node | 19,261 | skos:exactMatch |
| Source dataset | Destination dataset | Linked Data Mapping Rule | Number of connections | Semantic relationship |
|---|