http://rdf.ncbi.nlm.nih.gov/pubchem/patent/EP-3514531-A1

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filingDate 2019-01-21^^<http://www.w3.org/2001/XMLSchema#date>
inventor http://rdf.ncbi.nlm.nih.gov/pubchem/patentinventor/MD5_f3064a75a13a5e339dd49473fa7163f8
http://rdf.ncbi.nlm.nih.gov/pubchem/patentinventor/MD5_434a67fbc9cfcda529643856ae88902d
publicationDate 2019-07-24^^<http://www.w3.org/2001/XMLSchema#date>
publicationNumber EP-3514531-A1
titleOfInvention Method of generating an inclusion list for targeted mass spectrometric analysis
abstract A method of generating an inclusion list for targeted mass spectrometric analysis is disclosed. Experimentally-acquired data for a plurality of isobarically-labeled peptides derived by proteolytic digestion of a corresponding protein. The data includes, for each of the isobarically-labeled peptides, a mass-to-charge (m/z) ratio, a charge state, and a chromatographic retention time (RT). The method includes determining a hydrophobicity index (HI) of an unlabeled peptide corresponding to the isobarically-labeled peptide. If the determined HI is less than a threshold value, a substitute unlabeled peptide is selected in accordance with predetermined criteria and predicted properties for the substitute peptide are determined and stored on an inclusion list. If the determined HI for the unlabeled peptide is at least as great as the threshold value, predicted properties for the unlabeled peptide are determined and stored on an inclusion list. The substitute unlabeled peptide may be selected from an available peptide library.
priorityDate 2018-01-19^^<http://www.w3.org/2001/XMLSchema#date>
type http://data.epo.org/linked-data/def/patent/Publication

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