http://rdf.ncbi.nlm.nih.gov/pubchem/patent/US-8642263-B2

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filingDate 2005-11-10^^<http://www.w3.org/2001/XMLSchema#date>
grantDate 2014-02-04^^<http://www.w3.org/2001/XMLSchema#date>
inventor http://rdf.ncbi.nlm.nih.gov/pubchem/patentinventor/MD5_864233bc8eaf15b1b73d50fb344b41cc
http://rdf.ncbi.nlm.nih.gov/pubchem/patentinventor/MD5_9f8c53a0a49a7474e3b6e631e1a52491
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publicationDate 2014-02-04^^<http://www.w3.org/2001/XMLSchema#date>
publicationNumber US-8642263-B2
titleOfInvention High throughput methods comprising analysis of repetitive element DNA methylation
abstract Preferred aspects provide novel high-throughput, sensitive methods (e.g., real-time PCR-based (MethyLight™) reactions) for detection and/or measurement of global genomic 5-methylcytosine content, based on measurement of DNA methylation of Alu, LINE-1 repetitive sequences, and the chromosome 1 centromeric satellite alpha and juxtacentromeric satellite 2 repeat sequences. Additional aspects provide sensitive methods for determining the amount of a DNA (e.g., in formalin-fixed, paraffin-embedded tissues). Combined (mean) use of Alu and Sat2 repeat methylation measurements provides for a surprisingly close correlation with global genomic 5-methylcytosine content measurements obtained by HPLC. Methylation of Alu repeats was determined to be closely associated with HPLC-based global methylation levels, as was methylation of satellite 2 and LINE-1 global genomic 5-methylcytosine content. The assays provide surrogate markers for global genomic 5-methylcytosine content analyzes, and have substantial utility for high-throughput and population-based studies (e.g., genetic and dietary influences on global DNA methylation, folate deficiency, MTHFR gene polymorphisms, etc).
priorityDate 2004-11-10^^<http://www.w3.org/2001/XMLSchema#date>
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