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In and Out the minor groove: Interaction of an AT rich-DNA with the CD27 drug

X-ray diffraction
2.1Å resolution
PDB entry 4ocd coloured by chain, front view.
PDB entry 4ocd coloured by chain, side view.
PDB entry 4ocd coloured by chain, top view.
Source organism: Synthetic construct
Assembly composition:
homo dimer (preferred)
Entry contents: 1 distinct DNA molecule

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Assemblies

Assembly 1 (preferred)
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Assembly Name: DNA
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Multimeric state: homo dimer
Accessible surface area: 2929.17 Å2
Buried surface area: 1326.58 Å2
Dissociation area: 663.29 Å2
Dissociation energy (ΔGdiss): -3.81 kcal/mol
Dissociation entropy (TΔSdiss): 8.63 kcal/mol
Symmetry number: 2
PDBe Complex ID: PDB-CPX-117909
Assembly 2
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Assembly Name: DNA
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Multimeric state: homo dimer
Accessible surface area: 2887.32 Å2
Buried surface area: 1081.93 Å2
Dissociation area: 540.96 Å2
Dissociation energy (ΔGdiss): 8.5 kcal/mol
Dissociation entropy (TΔSdiss): 8.48 kcal/mol
Symmetry number: 2
PDBe Complex ID: PDB-CPX-117909

Macromolecules

DNA chains A, B, C
Name: d(AAAATTTT)
Representative chains: A, B, C
Source organism: Synthetic construct [32630]
Expression system: Not provided
Length: 8 nucleotides
Theoretical weight: 2.42 KDa
d(AAAATTTT) in PDB entry 4ocd, assembly 1, front view.
d(AAAATTTT) in PDB entry 4ocd, assembly 1, side view.
d(AAAATTTT) in PDB entry 4ocd, assembly 1, top view.
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