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The phoBR operon in Escherichia coli K-12.
Abstract
The phoB and phoR genes encode a transcription activator and a sensory protein of the phosphate regulon, respectively. It is shown here that they were transcribed as an operon in which the phoB gene was promoter proximal. Although an operon structure was suggested previously (K. Makino, H. Shinagawa, M. Amemura, and A. Nakata, J. Mol. Biol. 190:37-44 and 192:549-556, 1986), previous results showed only that phoR gene expression during phosphate limitation is dependent on the upstream phoB promoter. The phoR gene could still have had its own promoter for expression in the presence of phosphate. Two polar transposon-induced mutations are described which simultaneously abolished phoB and phoR gene function in cis; one mutation mapped in the phoB gene, and the other mapped upstream of the phoB gene. These results demonstrate an operon structure, in which phoR gene function required expression from the phoB promoter. Unexpectedly, an antisense pho omega Mu d1(lacZ) insertion within the promoter-proximal end of the phoB gene expressed the lacZ reporter gene, thus allowing for the possibility that the phoBR operon is regulated by an antisense RNA.
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- Boidol W, Simonis M, Töpert M, Siewert G. Recombinant plasmids with genes for the biosynthesis of alkaline phosphatase of Escherichia coli. Mol Gen Genet. 1982;185(3):510–512. [Abstract] [Google Scholar]
- Brickman E, Beckwith J. Analysis of the regulation of Escherichia coli alkaline phosphatase synthesis using deletions and phi80 transducing phages. J Mol Biol. 1975 Aug 5;96(2):307–316. [Abstract] [Google Scholar]
- Brickman E, Beckwith J. Analysis of the regulation of Escherichia coli alkaline phosphatase synthesis using deletions and phi80 transducing phages. J Mol Biol. 1975 Aug 5;96(2):307–316. [Abstract] [Google Scholar]
- Casadaban MJ, Cohen SN. Lactose genes fused to exogenous promoters in one step using a Mu-lac bacteriophage: in vivo probe for transcriptional control sequences. Proc Natl Acad Sci U S A. 1979 Sep;76(9):4530–4533. [Europe PMC free article] [Abstract] [Google Scholar]
- Chang CN, Kuang WJ, Chen EY. Nucleotide sequence of the alkaline phosphatase gene of Escherichia coli. Gene. 1986;44(1):121–125. [Abstract] [Google Scholar]
- DeFeyter RC, Pittard J. Genetic and molecular analysis of aroL, the gene for shikimate kinase II in Escherichia coli K-12. J Bacteriol. 1986 Jan;165(1):226–232. [Europe PMC free article] [Abstract] [Google Scholar]
- Deutch AH, Smith CJ, Rushlow KE, Kretschmer PJ. Escherichia coli delta 1-pyrroline-5-carboxylate reductase: gene sequence, protein overproduction and purification. Nucleic Acids Res. 1982 Dec 11;10(23):7701–7714. [Europe PMC free article] [Abstract] [Google Scholar]
- Enquist LW, Weisberg RA. The red plaque test: a rapid method for identification of excision defective variants of bacteriophage lambda. Virology. 1976 Jul 1;72(1):147–153. [Abstract] [Google Scholar]
- Guan CD, Wanner B, Inouye H. Analysis of regulation of phoB expression using a phoB-cat fusion. J Bacteriol. 1983 Nov;156(2):710–717. [Europe PMC free article] [Abstract] [Google Scholar]
- Hadley RG, Hu M, Timmons M, Yun K, Deonier RC. A partial restriction map of the proA-purE region of the Escherichia coli K12 chromosome. Gene. 1983 May-Jun;22(2-3):281–287. [Abstract] [Google Scholar]
- Hediger MA, Johnson DF, Nierlich DP, Zabin I. DNA sequence of the lactose operon: the lacA gene and the transcriptional termination region. Proc Natl Acad Sci U S A. 1985 Oct;82(19):6414–6418. [Europe PMC free article] [Abstract] [Google Scholar]
- Inouye H, Barnes W, Beckwith J. Signal sequence of alkaline phosphatase of Escherichia coli. J Bacteriol. 1982 Feb;149(2):434–439. [Europe PMC free article] [Abstract] [Google Scholar]
- Lloyd RG, Buckman C. Identification and genetic analysis of sbcC mutations in commonly used recBC sbcB strains of Escherichia coli K-12. J Bacteriol. 1985 Nov;164(2):836–844. [Europe PMC free article] [Abstract] [Google Scholar]
- Makino K, Shinagawa H, Amemura M, Nakata A. Nucleotide sequence of the phoB gene, the positive regulatory gene for the phosphate regulon of Escherichia coli K-12. J Mol Biol. 1986 Jul 5;190(1):37–44. [Abstract] [Google Scholar]
- Makino K, Shinagawa H, Amemura M, Nakata A. Nucleotide sequence of the phoR gene, a regulatory gene for the phosphate regulon of Escherichia coli. J Mol Biol. 1986 Dec 5;192(3):549–556. [Abstract] [Google Scholar]
- Makino K, Shinagawa H, Nakata A. Regulation of the phosphate regulon of Escherichia coli K-12: regulation and role of the regulatory gene phoR. J Mol Biol. 1985 Jul 20;184(2):231–240. [Abstract] [Google Scholar]
- Messing J, Vieira J. A new pair of M13 vectors for selecting either DNA strand of double-digest restriction fragments. Gene. 1982 Oct;19(3):269–276. [Abstract] [Google Scholar]
- Mizuno T, Chou MY, Inouye M. A unique mechanism regulating gene expression: translational inhibition by a complementary RNA transcript (micRNA). Proc Natl Acad Sci U S A. 1984 Apr;81(7):1966–1970. [Europe PMC free article] [Abstract] [Google Scholar]
- Mizusawa S, Ward DF. A bacteriophage lambda vector for cloning with BamHI and Sau3A. Gene. 1982 Dec;20(3):317–322. [Abstract] [Google Scholar]
- Shinagawa H, Makino K, Nakata A. Regulation of the pho regulon in Escherichia coli K-12. Genetic and physiological regulation of the positive regulatory gene phoB. J Mol Biol. 1983 Aug 15;168(3):477–488. [Abstract] [Google Scholar]
- Shuttleworth H, Taylor J, Minton N. Sequence of the gene for alkaline phosphatase from Escherichia coli JM83. Nucleic Acids Res. 1986 Nov 11;14(21):8689–8689. [Europe PMC free article] [Abstract] [Google Scholar]
- Tommassen J, de Geus P, Lugtenberg B, Hackett J, Reeves P. Regulation of the pho regulon of Escherichia coli K-12. Cloning of the regulatory genes phoB and phoR and identification of their gene products. J Mol Biol. 1982 May 15;157(2):265–274. [Abstract] [Google Scholar]
- Tommassen J, Heimstra P, Overduin P, Lugtenberg B. Cloning of phoM, a gene involved in regulation of the synthesis of phosphate limitation inducible proteins in Escherichia coli K12. Mol Gen Genet. 1984;195(1-2):190–194. [Abstract] [Google Scholar]
- Wackett LP, Wanner BL, Venditti CP, Walsh CT. Involvement of the phosphate regulon and the psiD locus in carbon-phosphorus lyase activity of Escherichia coli K-12. J Bacteriol. 1987 Apr;169(4):1753–1756. [Europe PMC free article] [Abstract] [Google Scholar]
- Wanner BL. Novel regulatory mutants of the phosphate regulon in Escherichia coli K-12. J Mol Biol. 1986 Sep 5;191(1):39–58. [Abstract] [Google Scholar]
- Wanner BL. Control of phoR-dependent bacterial alkaline phosphatase clonal variation by the phoM region. J Bacteriol. 1987 Feb;169(2):900–903. [Europe PMC free article] [Abstract] [Google Scholar]
- Wanner BL. Molecular cloning of Mu d(bla lacZ) transcriptional and translational fusions. J Bacteriol. 1987 May;169(5):2026–2030. [Europe PMC free article] [Abstract] [Google Scholar]
- Wanner BL, Latterell P. Mutants affected in alkaline phosphatase, expression: evidence for multiple positive regulators of the phosphate regulon in Escherichia coli. Genetics. 1980 Oct;96(2):353–366. [Europe PMC free article] [Abstract] [Google Scholar]
- Wanner BL, McSharry R. Phosphate-controlled gene expression in Escherichia coli K12 using Mudl-directed lacZ fusions. J Mol Biol. 1982 Jul 5;158(3):347–363. [Abstract] [Google Scholar]
- Wanner BL, Sarthy A, Beckwith J. Escherichia coli pleiotropic mutant that reduces amounts of several periplasmic and outer membrane proteins. J Bacteriol. 1979 Oct;140(1):229–239. [Europe PMC free article] [Abstract] [Google Scholar]
- Wanner BL, Wieder S, McSharry R. Use of bacteriophage transposon Mu d1 to determine the orientation for three proC-linked phosphate-starvation-inducible (psi) genes in Escherichia coli K-12. J Bacteriol. 1981 Apr;146(1):93–101. [Europe PMC free article] [Abstract] [Google Scholar]
- Yanisch-Perron C, Vieira J, Messing J. Improved M13 phage cloning vectors and host strains: nucleotide sequences of the M13mp18 and pUC19 vectors. Gene. 1985;33(1):103–119. [Abstract] [Google Scholar]
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