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A NumPy port of the foldseek code for encoding protein structures to 3di.
Official repository for the Boltz-1 biomolecular interaction model
Flet enables developers to easily build realtime web, mobile and desktop apps in Python. No frontend experience required.
[CVPR 2024] Official implementation for "SVGDreamer: Text Guided SVG Generation with Diffusion Model" https://arxiv.org/abs/2312.16476
A trainable PyTorch reproduction of AlphaFold 3.
A comprehensive foundation model for cryo-EM image processing
Efficient manipulation of protein structures in Python
Tool to read crystallographic and cryo-EM files and interpolate density values onto a cartesian grid map
P2Rank: Protein-ligand binding site prediction from protein structure based on machine learning.
Fast AlphaFold-Multimer based pipeline for Protein-Protein Interaction (PPI) screening
Python code for fine-tuning AlphaFold to perform protein-peptide binding predictions
SaprotHub: Making Protein Modeling Accessible to All Biologists
Library for rapid prototyping of native WebGPU Apps in C++ using Dawn
A shim and command-line tool to use Bluetooth Classic features on Windows.
CryoJam: Automating Protein Homolog Fitting in Medium Resolution Cryo-EM Density Maps Using Deep Learning
Foldseek enables fast and sensitive comparisons of large structure sets.
Metrics for our protein design competitions.
ChimeraX command to predict isosurface levels for 3D density maps
Automated detection of structural blocks in cryo-EM volume ensembles
HyperStudio's transform provider for RayNeo Air/1S.
Geometric deep learning method to predict protein binding interfaces from a protein structure.
Fusion of protein sequence and structural information, using denoising pre-training network for zero-shot protein engineering (eLife 2024).
Identifying peptide-receptor interactions using AlphaFold-Multimer