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3J9G

Atomic model of the VipA/VipB, the type six secretion system contractile sheath of Vibrio cholerae from cryo-EM

This is a non-PDB format compatible entry.
Summary for 3J9G
Entry DOI10.2210/pdb3j9g/pdb
EMDB information2699
DescriptorVipA, VipB (2 entities in total)
Functional Keywordst6ss, bacterial secretion, phage, contraction, contractile protein
Biological sourceVibrio cholerae O1 biovar El Tor str. N16961
More
Total number of polymer chains60
Total formula weight1886523.00
Authors
Kudryashev, M.,Wang, R.Y.-R.,Brackmann, M.,Scherer, S.,Maier, T.,Baker, D.,DiMaio, F.,Stahlberg, H.,Egelman, E.H.,Basler, M. (deposition date: 2015-01-16, release date: 2015-03-11, Last modification date: 2024-02-21)
Primary citationKudryashev, M.,Wang, R.Y.,Brackmann, M.,Scherer, S.,Maier, T.,Baker, D.,DiMaio, F.,Stahlberg, H.,Egelman, E.H.,Basler, M.
Structure of the Type VI Secretion System Contractile Sheath.
Cell(Cambridge,Mass.), 160:952-962, 2015
Cited by
PubMed Abstract: Bacteria use rapid contraction of a long sheath of the type VI secretion system (T6SS) to deliver effectors into a target cell. Here, we present an atomic-resolution structure of a native contracted Vibrio cholerae sheath determined by cryo-electron microscopy. The sheath subunits, composed of tightly interacting proteins VipA and VipB, assemble into a six-start helix. The helix is stabilized by a core domain assembled from four β strands donated by one VipA and two VipB molecules. The fold of inner and middle layers is conserved between T6SS and phage sheaths. However, the structure of the outer layer is distinct and suggests a mechanism of interaction of the bacterial sheath with an accessory ATPase, ClpV, that facilitates multiple rounds of effector delivery. Our results provide a mechanistic insight into assembly of contractile nanomachines that bacteria and phages use to translocate macromolecules across membranes.
PubMed: 25723169
DOI: 10.1016/j.cell.2015.01.037
PDB entries with the same primary citation
Experimental method
ELECTRON MICROSCOPY (3.5 Å)
Structure validation

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