3J9G
Atomic model of the VipA/VipB, the type six secretion system contractile sheath of Vibrio cholerae from cryo-EM
This is a non-PDB format compatible entry.
Summary for 3J9G
Entry DOI | 10.2210/pdb3j9g/pdb |
EMDB information | 2699 |
Descriptor | VipA, VipB (2 entities in total) |
Functional Keywords | t6ss, bacterial secretion, phage, contraction, contractile protein |
Biological source | Vibrio cholerae O1 biovar El Tor str. N16961 More |
Total number of polymer chains | 60 |
Total formula weight | 1886523.00 |
Authors | Kudryashev, M.,Wang, R.Y.-R.,Brackmann, M.,Scherer, S.,Maier, T.,Baker, D.,DiMaio, F.,Stahlberg, H.,Egelman, E.H.,Basler, M. (deposition date: 2015-01-16, release date: 2015-03-11, Last modification date: 2024-02-21) |
Primary citation | Kudryashev, M.,Wang, R.Y.,Brackmann, M.,Scherer, S.,Maier, T.,Baker, D.,DiMaio, F.,Stahlberg, H.,Egelman, E.H.,Basler, M. Structure of the Type VI Secretion System Contractile Sheath. Cell(Cambridge,Mass.), 160:952-962, 2015 Cited by PubMed Abstract: Bacteria use rapid contraction of a long sheath of the type VI secretion system (T6SS) to deliver effectors into a target cell. Here, we present an atomic-resolution structure of a native contracted Vibrio cholerae sheath determined by cryo-electron microscopy. The sheath subunits, composed of tightly interacting proteins VipA and VipB, assemble into a six-start helix. The helix is stabilized by a core domain assembled from four β strands donated by one VipA and two VipB molecules. The fold of inner and middle layers is conserved between T6SS and phage sheaths. However, the structure of the outer layer is distinct and suggests a mechanism of interaction of the bacterial sheath with an accessory ATPase, ClpV, that facilitates multiple rounds of effector delivery. Our results provide a mechanistic insight into assembly of contractile nanomachines that bacteria and phages use to translocate macromolecules across membranes. PubMed: 25723169DOI: 10.1016/j.cell.2015.01.037 PDB entries with the same primary citation |
Experimental method | ELECTRON MICROSCOPY (3.5 Å) |
Structure validation
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