Acanthopagrus latus (yellowfin seabream): 119006605
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Entry
119006605 CDS
T08233
Symbol
fdps
Name
(RefSeq) farnesyl pyrophosphate synthase isoform X1
KO
K00787
farnesyl diphosphate synthase [EC:
2.5.1.1
2.5.1.10
]
Organism
alat
Acanthopagrus latus (yellowfin seabream)
Pathway
alat00900
Terpenoid backbone biosynthesis
alat01100
Metabolic pathways
Module
alat_M00367
C10-C20 isoprenoid biosynthesis, non-plant eukaryotes
Brite
KEGG Orthology (KO) [BR:
alat00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
119006605 (fdps)
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
alat01006
]
119006605 (fdps)
Enzymes [BR:
alat01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
119006605 (fdps)
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
119006605 (fdps)
Prenyltransferases [BR:
alat01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
119006605 (fdps)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
Pfc11_Rna14-15-ID
Motif
Other DBs
NCBI-GeneID:
119006605
NCBI-ProteinID:
XP_036931387
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All DBs
Position
17:18807850..18812384
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AA seq
399 aa
AA seq
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MRRLLSWVINAPKTIRTMWLTLAASPLKLKNTSLMLCTSSFQGDNLCNGTHGKKALLSDC
QLFEGQFEELVTELTERDLSDPALADALSRLREVLVYNSPGGKRNRGLSVIGSLRELLPP
NQLTQDVVQRALLVGWCIELLQAFFLVADDIMDASVTRRGQPCWYKKDGIGLDAINDSFL
LEGSIYRLLRRHCRDQPYYVHLLELFTETSFQTELGQALDLMTAPPGQIDLNRFTMERYK
AIVKYKTAYYSFYLPVAAAMYIAGIKSEVEHNNAKHILLEMGEFFQIQDDYLDCYGDPAV
TGKIGTDIQDNKCSWLVVTALEIMTPEQRAELEACYGRHDDASVEKVKALYNTLQMPALY
RKYEDESYQRLQKLITGHAQNLPHSVFHNFANKIYKRNK
NT seq
1200 nt
NT seq
+upstream
nt +downstream
nt
atgagacgcctgctgagctgggtcattaatgcccctaaaacaatccgaaccatgtggcta
acgttagccgcctcccctctgaagttaaagaacacatctctgatgttgtgcacctcgtct
ttccagggagacaacctctgcaacgggacgcacggcaagaaggcgctgctgtccgactgc
cagctctttgaaggccagtttgaggagctggtgacggagctgacagagagggacctcagc
gaccctgcgttggccgacgctctgagcaggttgagagaggtgttggtgtataattctcct
ggaggcaagcggaacagaggcctgtctgtgattggctcactgagggaacttctcccaccc
aatcagctcacacaggatgtggtgcagcgggctctgttggtcggctggtgcattgagctg
cttcaggcatttttcctggtggctgatgatattatggatgcgtctgtaactcggagagga
cagccctgctggtacaagaaggatggaataggtctggatgccatcaatgattcatttctc
ttagaggggtcgatctacagactacttcgcagacattgcagggatcagccctactacgtc
caccttctggagctatttactgagacatctttccaaaccgagctcggccaagctttggac
ctcatgacggctcctcctggtcagattgacctcaacagattcaccatggagaggtataaa
gctattgtgaaatacaagactgcctattactccttctacctcccggtggcagctgcgatg
tacattgcaggaattaagagtgaagtggagcataacaatgccaaacacatcttgcttgag
atgggagagttctttcaaatacaggatgactacttggactgttacggagaccctgctgtg
acaggaaagattggtacagacatccaggataacaaatgcagctggttggtggtgaccgct
ttggagatcatgactcccgaacagagagcagagctggaggcatgttacgggcgccacgac
gatgccagtgtggaaaaggtcaaagcactgtacaacaccctgcaaatgccagcgctgtac
cgcaaatatgaagatgagagctaccagcggctacagaaactcatcacaggtcacgctcag
aacctccctcactcagtcttccacaactttgccaataagatctacaagaggaacaagtga
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