Daucus carota (carrot): 108219876
Help
Entry
108219876 CDS
T05350
Name
(RefSeq) farnesyl pyrophosphate synthase
KO
K00787
farnesyl diphosphate synthase [EC:
2.5.1.1
2.5.1.10
]
Organism
dcr
Daucus carota (carrot)
Pathway
dcr00900
Terpenoid backbone biosynthesis
dcr01100
Metabolic pathways
dcr01110
Biosynthesis of secondary metabolites
Module
dcr_M00366
C10-C20 isoprenoid biosynthesis, plants
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
108219876
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
dcr01006
]
108219876
Enzymes [BR:
dcr01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
108219876
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
108219876
Prenyltransferases [BR:
dcr01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
108219876
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
Pfc11_Rna14-15-ID
Peptidase_M13_N
Motif
Other DBs
NCBI-GeneID:
108219876
NCBI-ProteinID:
XP_017248920
UniProt:
A0A164Y0S3
LinkDB
All DBs
Position
5:complement(11048261..11051823)
Genome browser
AA seq
342 aa
AA seq
DB search
MGGDLKAKFLEVYSVLKSELLSDPAFEFTDDSRLWVERMLDYNVPGGKLNRGLSVIDSYK
LLKGQELDDDEIFLSSALGWCIEWLQAYFLVLDDIMDGSHTRRGQPCWFRVPKVGMIAVN
DGILLRNHIPRILKKHFRQKPYYVDLLDLFNEVEFQTACGQMIDLITTLVGEKDLSKYSL
PIHRRIVQYKTAYYSFYLPVACALLMAGEDLEKHTNVKDILIEMGTYFQVQDDYLDCFGA
PEVIGKIGTDIEDFKCSWLVVKALELSNEEQKKFLYENYGKEDPASVAKVKELYNTLKLE
DVFAEYESKSYEKLINFIEAHPNTSVQAVLKSFLGKIYKRQK
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
atgggcggcgatctcaaggccaagtttctggaggtctactctgttctcaaatccgaattg
ctgagcgaccctgccttcgaattcaccgatgattctcgcctctgggtcgaaaggatgcta
gactacaatgtgcctggagggaagctgaatcgggggctttctgttattgacagctacaaa
ctgttgaaaggacaagaacttgatgatgacgaaattttcctttcaagcgcacttggttgg
tgtattgaatggcttcaagcttactttcttgtgcttgatgacattatggatggctcgcac
acacgcagaggtcaaccttgttggttcagagtgcccaaggttggtatgattgctgtcaat
gatggcattttgcttcgcaaccatatcccaaggattctaaagaaacattttcggcaaaaa
ccttactatgtggacctgttggatctatttaatgaggtggagttccagacagcttgtgga
cagatgatagatctgatcaccacccttgtaggagagaaagacttgtctaagtattcattg
cctattcaccgccggattgtgcagtacaaaacagcttactactcattttatcttccagtg
gcctgcgcgcttcttatggctggtgaagatcttgagaaacatactaatgtgaaggacata
cttattgaaatgggaacgtattttcaagtgcaggacgattacctggattgctttggtgca
ccagaggtaattgggaagattggaacagatatcgaagatttcaagtgctcctggttggtt
gtaaaagcacttgaactttctaatgaggaacagaagaagtttctatatgaaaactatgga
aaggaggatccagcctctgtagctaaagtgaaagagctatacaatactctcaagcttgag
gatgtattcgcagagtatgagagcaaaagctatgaaaagttgatcaacttcattgaagct
catccaaacacatctgtgcaagcagtgttaaaatcatttttgggaaagatatacaagagg
caaaaataa
DBGET
integrated database retrieval system